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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
53 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170570361
FLMP01540102
273758
Gammaproteobacteria
GAC
Val
>WENV170567626
FLMP01002715
271464
Gammaproteobacteria
TGG
Pro
>WENV170567681
FLMP01003525
271464
Gammaproteobacteria
TGG
Pro
>WENV170567994
FLMP01012451
271464
Gammaproteobacteria
TGG
Pro
>WENV170568613
FLMP01055438
271464
Gammaproteobacteria
TGG
Pro
>WENV170568938
FLMP01100121
271464
Gammaproteobacteria
TGG
Pro
>WENV170569349
FLMP01176683
271464
Gammaproteobacteria
TGG
Pro
>WENV170569542
FLMP01227349
271464
Gammaproteobacteria
TGG
Pro
>WENV170569982
FLMP01374564
271464
Gammaproteobacteria
TGG
Pro
>WENV170570110
FLMP01425131
271464
Gammaproteobacteria
TGG
Pro
>WENV170570222
FLMP01472551
271464
Gammaproteobacteria
TGG
Pro
>WENV170567376
FLMP01000154
474520
Gammaproteobacteria
CCA
Trp
>WENV170567349
FLMP01000070
270982
Gammaproteobacteria
GAT
Ile
>WENV170567459
FLMP01000653
270982
Gammaproteobacteria
GAT
Ile
>WENV170567768
FLMP01005130
270982
Gammaproteobacteria
GAT
Ile
>WENV170568031
FLMP01013736
270982
Gammaproteobacteria
GAT
Ile
>WENV170569302
FLMP01164624
270982
Gammaproteobacteria
GAT
Ile
>WENV170569484
FLMP01215200
270982
Gammaproteobacteria
GAT
Ile
>WENV170567875
FLMP01008473
455942
Gammaproteobacteria
GCC
Gly
>WENV170570288
FLMP01501779
455942
Gammaproteobacteria
GCC
Gly
>WENV170570205
FLMP01464406
454859
Gammaproteobacteria
GAA
Phe
>WENV170570351
FLMP01536189
454859
Gammaproteobacteria
GAA
Phe
>WENV170569463
FLMP01210339
273752
Gammaproteobacteria
CAT
Met
>WENV170569251
FLMP01156726
460422
Gammaproteobacteria
TAC
Val
>WENV170569366
FLMP01183146
460422
Gammaproteobacteria
TAC
Val
>WENV170569949
FLMP01364184
780220
Gammaproteobacteria
GCA
Cys
>WENV170567408
FLMP01000359
284535
Gammaproteobacteria
CCG
Arg
>WENV170568978
FLMP01104541
271615
Gammaproteobacteria
GAT
Ile
>WENV170569950
FLMP01364184
112792
Gammaproteobacteria
TAA
Leu
>WENV170569952
FLMP01364184
112792
Gammaproteobacteria
TAA
Leu
>WENV170567345
FLMP01000053
456511
Gammaproteobacteria
GAA
Phe
>WENV170568025
FLMP01013476
456511
Gammaproteobacteria
GAA
Phe
>WENV170569951
FLMP01364184
454855
Gammaproteobacteria
GCC
Gly
>WENV170569544
FLMP01227350
273724
Gammaproteobacteria
TCT
Arg
>WENV170570353
FLMP01536362
454864
Gammaproteobacteria
TAC
Val
>WENV170570258
FLMP01486979
459731
Gammaproteobacteria
GGT
Thr
>WENV170568524
FLMP01046899
459731
Gammaproteobacteria
GGT
Thr
>WENV170568266
FLMP01026148
459731
Gammaproteobacteria
GGT
Thr
>WENV170568161
FLMP01020032
459731
Gammaproteobacteria
GGT
Thr
>WENV170567558
FLMP01001784
459731
Gammaproteobacteria
GGT
Thr
>WENV170567375
FLMP01000154
459731
Gammaproteobacteria
GGT
Thr
>WENV170568979
FLMP01104541
452602
Gammaproteobacteria
TGC
Ala
>WENV170567877
FLMP01008506
277966
Gammaproteobacteria
CAT
Met
>WENV170568521
FLMP01046846
457459
Gammaproteobacteria
GGC
Ala
>WENV170569377
FLMP01188645
457459
Gammaproteobacteria
GGC
Ala
>WENV170568263
FLMP01026148
454397
Gammaproteobacteria
TGT
Thr
>WENV170568168
FLMP01020580
454397
Gammaproteobacteria
TGT
Thr
>WENV170567461
FLMP01000653
454397
Gammaproteobacteria
TGT
Thr
>WENV170567372
FLMP01000154
454397
Gammaproteobacteria
TGT
Thr
>WENV170569722
FLMP01280601
466510
Gammaproteobacteria
GCC
Gly
>WENV170567543
FLMP01001699
466510
Gammaproteobacteria
GCC
Gly
>WENV170570352
FLMP01536189
454860
Gammaproteobacteria
TGT
Thr
>WENV170568022
FLMP01013324
471158
Gammaproteobacteria
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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