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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
9 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180007994
FLSB01002622
5774
Gammaproteobacteria
>WENV180008970
FLSB01258366
8231
Gammaproteobacteria
GCT
Ser
>WENV180007829
FLSB01000121
154084
Gammaproteobacteria
CAA
Leu
>WENV180008382
FLSB01022240
653844
Gammaproteobacteria
TTG
Gln
>WENV180008712
FLSB01112163
653844
Gammaproteobacteria
TTG
Gln
>WENV180008713
FLSB01112163
653844
Gammaproteobacteria
TTG
Gln
>WENV180008268
FLSB01010571
46098
Gammaproteobacteria
GGA
Ser
>WENV180008495
FLSB01043343
271162
Gammaproteobacteria
CAT
Met
>WENV180008598
FLSB01070802
180615
Gammaproteobacteria
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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