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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170576179
FRDC01000032
453993
Alphaproteobacteria
GAA
Phe
>WENV170576216
FRDC01000151
482793
Alphaproteobacteria
TTC
Glu
>WENV170576218
FRDC01000151
452753
Alphaproteobacteria
GAA
Phe
>WENV170576270
FRDC01000267
274234
Alphaproteobacteria
CAT
Met
>WENV170576522
FRDC01000799
273438
Alphaproteobacteria
TGG
Pro
>WENV170576574
FRDC01000954
780123
Alphaproteobacteria
CTG
Gln
>WENV170576622
FRDC01001123
654792
Alphaproteobacteria
GGT
Thr
>WENV170576624
FRDC01001161
453990
Alphaproteobacteria
CGC
Ala
>WENV170576651
FRDC01001269
654944
Alphaproteobacteria
TGT
Thr
>WENV170576739
FRDC01001637
180390
Alphaproteobacteria
CAA
Leu
>WENV170576885
FRDC01002003
299073
Alphaproteobacteria
GAT
Ile
>WENV170576894
FRDC01002079
454180
Alphaproteobacteria
CGT
Thr
>WENV170576900
FRDC01002086
181193
Alphaproteobacteria
GAG
Leu
>WENV170576939
FRDC01002340
655013
Alphaproteobacteria
TGT
Thr
>WENV170576982
FRDC01002537
654915
Alphaproteobacteria
GCC
Gly
>WENV170577026
FRDC01002814
780126
Alphaproteobacteria
GCA
Cys
>WENV170577027
FRDC01002814
654523
Alphaproteobacteria
GTT
Asn
>WENV170577133
FRDC01003531
655105
Alphaproteobacteria
TGT
Thr
>WENV170577313
FRDC01004414
184579
Alphaproteobacteria
CAG
Leu
>WENV170577366
FRDC01004917
654946
Alphaproteobacteria
TTG
Gln
>WENV170577372
FRDC01004987
454489
Alphaproteobacteria
CGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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