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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180025480
FTIP01013410
180939
Betaproteobacteria
GTA
Tyr
>WENV180025602
FTIP01107021
282077
Betaproteobacteria
TTG
Gln
>WENV180025691
FTIP01363161
282077
Betaproteobacteria
TTG
Gln
>WENV180025495
FTIP01022520
452202
Betaproteobacteria
TAC
Val
>WENV180025623
FTIP01161807
276282
Betaproteobacteria
CAT
Met
>WENV180025507
FTIP01027390
455934
Betaproteobacteria
TTC
Glu
>WENV180025427
FTIP01003690
464315
Betaproteobacteria
GTT
Asn
>WENV180025433
FTIP01003994
464315
Betaproteobacteria
GTT
Asn
>WENV180025452
FTIP01005972
464315
Betaproteobacteria
GTT
Asn
>WENV180025510
FTIP01029201
464315
Betaproteobacteria
GTT
Asn
>WENV180025654
FTIP01253324
464315
Betaproteobacteria
GTT
Asn
>WENV180025625
FTIP01168516
283585
Betaproteobacteria
CAT
Met
>WENV180025587
FTIP01095226
283585
Betaproteobacteria
CAT
Met
>WENV180025584
FTIP01093892
283585
Betaproteobacteria
CAT
Met
>WENV180025547
FTIP01048776
283585
Betaproteobacteria
CAT
Met
>WENV180025538
FTIP01045542
283585
Betaproteobacteria
CAT
Met
>WENV180025492
FTIP01021355
283585
Betaproteobacteria
CAT
Met
>WENV180025491
FTIP01021188
283585
Betaproteobacteria
CAT
Met
>WENV180025457
FTIP01006697
283585
Betaproteobacteria
CAT
Met
>WENV180025398
FTIP01001381
283585
Betaproteobacteria
CAT
Met
>WENV180025397
FTIP01001381
283585
Betaproteobacteria
CAT
Met
>WENV180025390
FTIP01001045
283585
Betaproteobacteria
CAT
Met
>WENV180025388
FTIP01000964
283585
Betaproteobacteria
CAT
Met
>WENV180025359
FTIP01000254
283585
Betaproteobacteria
CAT
Met
>WENV180025447
FTIP01005367
283584
Betaproteobacteria
CAT
Met
>WENV180025432
FTIP01003968
283584
Betaproteobacteria
CAT
Met
>WENV180025413
FTIP01002250
283584
Betaproteobacteria
CAT
Met
>WENV180025405
FTIP01001853
283584
Betaproteobacteria
CAT
Met
>WENV180025422
FTIP01003090
273483
Betaproteobacteria
ACG
Arg
>WENV180025423
FTIP01003090
273483
Betaproteobacteria
ACG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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