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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180026001
FTIR01002178
463660
Betaproteobacteria
CCA
Trp
>WENV180026111
FTIR01082437
463660
Betaproteobacteria
CCA
Trp
>WENV180026055
FTIR01009423
465524
Betaproteobacteria
TGC
Ala
>WENV180026149
FTIR01169781
465524
Betaproteobacteria
TGC
Ala
>WENV180025982
FTIR01001432
282077
Betaproteobacteria
TTG
Gln
>WENV180025928
FTIR01000287
464315
Betaproteobacteria
GTT
Asn
>WENV180026171
FTIR01236147
464315
Betaproteobacteria
GTT
Asn
>WENV180026211
FTIR01376837
464315
Betaproteobacteria
GTT
Asn
>WENV180025914
FTIR01000099
283585
Betaproteobacteria
CAT
Met
>WENV180025960
FTIR01000918
283585
Betaproteobacteria
CAT
Met
>WENV180026029
FTIR01002793
283585
Betaproteobacteria
CAT
Met
>WENV180026229
FTIR01451712
283584
Betaproteobacteria
CAT
Met
>WENV180026034
FTIR01003797
283584
Betaproteobacteria
CAT
Met
>WENV180025907
FTIR01000018
283584
Betaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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