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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180026600
FTIU01004692
273790
Betaproteobacteria
CAT
Met
>WENV180026840
FTIU01274893
273790
Betaproteobacteria
CAT
Met
>WENV180026654
FTIU01010985
283460
Betaproteobacteria
TCT
Arg
>WENV180026493
FTIU01000124
273217
Betaproteobacteria
ACG
Arg
>WENV180026512
FTIU01000801
273217
Betaproteobacteria
ACG
Arg
>WENV180026874
FTIU01605807
273217
Betaproteobacteria
ACG
Arg
>WENV180026519
FTIU01001052
455327
Betaproteobacteria
GCC
Gly
>WENV180026613
FTIU01005438
454902
Betaproteobacteria
CGC
Ala
>WENV180026707
FTIU01033320
273289
Betaproteobacteria
CAT
Met
>WENV180026635
FTIU01007073
273261
Betaproteobacteria
TGG
Pro
>WENV180026653
FTIU01010715
452923
Betaproteobacteria
TTT
Lys
>WENV180026852
FTIU01298647
273791
Betaproteobacteria
TTG
Gln
>WENV180026501
FTIU01000292
780081
Betaproteobacteria
CCC
Gly
>WENV180026740
FTIU01067306
271596
Betaproteobacteria
GAT
Ile
>WENV180026550
FTIU01002197
276012
Betaproteobacteria
TTG
Gln
>WENV180026503
FTIU01000384
180358
Betaproteobacteria
CAG
Leu
>WENV180026527
FTIU01001320
180358
Betaproteobacteria
CAG
Leu
>WENV180026665
FTIU01014362
180358
Betaproteobacteria
CAG
Leu
>WENV180026741
FTIU01067306
452924
Betaproteobacteria
TGC
Ala
>WENV180026685
FTIU01022301
452924
Betaproteobacteria
TGC
Ala
>WENV180026558
FTIU01002631
654880
Betaproteobacteria
GGT
Thr
>WENV180026839
FTIU01274563
780080
Betaproteobacteria
GCA
Cys
>WENV180026642
FTIU01008399
32667
Betaproteobacteria
GGA
Ser
>WENV180026641
FTIU01008340
112709
Betaproteobacteria
TAG
Leu
>WENV180026630
FTIU01006280
454316
Betaproteobacteria
TGT
Thr
>WENV180026588
FTIU01004062
780070
Betaproteobacteria
GCA
Cys
>WENV180026504
FTIU01000389
457269
Betaproteobacteria
CTT
Lys
>WENV180026646
FTIU01009552
457269
Betaproteobacteria
CTT
Lys
>WENV180026538
FTIU01001836
8271
Betaproteobacteria
GCT
Ser
>WENV180026557
FTIU01002631
780079
Betaproteobacteria
TCC
Gly
>WENV180026621
FTIU01005820
455934
Betaproteobacteria
TTC
Glu
>WENV180026559
FTIU01002697
659965
Betaproteobacteria
CCC
Gly
>WENV180026676
FTIU01019335
454349
Betaproteobacteria
CCG
Arg
>WENV180026556
FTIU01002580
454342
Betaproteobacteria
CCA
Trp
>WENV180026543
FTIU01001958
456523
Betaproteobacteria
TTC
Glu
>WENV180026703
FTIU01029133
456523
Betaproteobacteria
TTC
Glu
>WENV180026716
FTIU01038733
30661
Betaproteobacteria
GGA
Ser
>WENV180026499
FTIU01000210
653938
Betaproteobacteria
CAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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