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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180033930
FTKM01001950
113518
Alphaproteobacteria
CAG
Leu
>WENV180034077
FTKM01543072
113518
Alphaproteobacteria
CAG
Leu
>WENV180034109
FTKM01680083
113518
Alphaproteobacteria
CAG
Leu
>WENV180034110
FTKM01680085
653817
Alphaproteobacteria
CAC
Val
>WENV180033888
FTKM01000007
782892
Alphaproteobacteria
TTG
Gln
>WENV180033912
FTKM01000022
671377
Alphaproteobacteria
GGT
Thr
>WENV180033891
FTKM01000007
181042
Alphaproteobacteria
GAG
Leu
>WENV180034013
FTKM01072074
660487
Alphaproteobacteria
GCC
Gly
>WENV180033931
FTKM01001950
273364
Alphaproteobacteria
CAT
Met
>WENV180034071
FTKM01498003
784639
Alphaproteobacteria
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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