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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180033916
FTKM01000483
180345
Betaproteobacteria
CAA
Leu
>WENV180033919
FTKM01000866
654864
Betaproteobacteria
CCT
Arg
>WENV180033920
FTKM01000903
282077
Betaproteobacteria
TTG
Gln
>WENV180033949
FTKM01007993
180345
Betaproteobacteria
CAA
Leu
>WENV180033950
FTKM01009329
273217
Betaproteobacteria
ACG
Arg
>WENV180033951
FTKM01009329
273217
Betaproteobacteria
ACG
Arg
>WENV180033967
FTKM01015265
455528
Betaproteobacteria
CCG
Arg
>WENV180033992
FTKM01037384
112341
Betaproteobacteria
CAG
Leu
>WENV180033993
FTKM01037384
112342
Betaproteobacteria
CAG
Leu
>WENV180034008
FTKM01069185
274398
Betaproteobacteria
CAT
Met
>WENV180034023
FTKM01102846
454294
Betaproteobacteria
TTT
Lys
>WENV180034079
FTKM01557460
274641
Betaproteobacteria
TTG
Gln
>WENV180034090
FTKM01657710
464315
Betaproteobacteria
GTT
Asn
>WENV180034096
FTKM01678137
455327
Betaproteobacteria
GCC
Gly
>WENV180034104
FTKM01680079
30693
Betaproteobacteria
GGA
Ser
>WENV180034108
FTKM01680081
654863
Betaproteobacteria
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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