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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
68 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170634585
FYBJ01002378
653537
Alphaproteobacteria
GGT
Thr
>WENV170634464
FYBJ01001407
655365
Alphaproteobacteria
TTC
Glu
>WENV170634512
FYBJ01001611
787707
Alphaproteobacteria
CCC
Gly
>WENV170634492
FYBJ01001485
273797
Alphaproteobacteria
GGG
Pro
>WENV170634340
FYBJ01000257
180489
Alphaproteobacteria
TAG
Leu
>WENV170634410
FYBJ01001072
655167
Alphaproteobacteria
TTC
Glu
>WENV170634472
FYBJ01001423
655167
Alphaproteobacteria
TTC
Glu
>WENV170634507
FYBJ01001567
457318
Alphaproteobacteria
CGT
Thr
>WENV170634473
FYBJ01001426
273805
Alphaproteobacteria
ACG
Arg
>WENV170634380
FYBJ01000806
653534
Alphaproteobacteria
GCC
Gly
>WENV170634381
FYBJ01000806
653534
Alphaproteobacteria
GCC
Gly
>WENV170634515
FYBJ01001627
653534
Alphaproteobacteria
GCC
Gly
>WENV170634516
FYBJ01001627
653534
Alphaproteobacteria
GCC
Gly
>WENV170634517
FYBJ01001627
653534
Alphaproteobacteria
GCC
Gly
>WENV170634500
FYBJ01001523
112803
Alphaproteobacteria
CAG
Leu
>WENV170634402
FYBJ01001000
273799
Alphaproteobacteria
CCG
Arg
>WENV170634481
FYBJ01001448
273799
Alphaproteobacteria
CCG
Arg
>WENV170634557
FYBJ01002037
273799
Alphaproteobacteria
CCG
Arg
>WENV170634408
FYBJ01001058
275154
Alphaproteobacteria
GTG
His
>WENV170634518
FYBJ01001627
218119
Alphaproteobacteria
>WENV170634331
FYBJ01000191
218119
Alphaproteobacteria
>WENV170634318
FYBJ01000165
321511
Alphaproteobacteria
CAT
Met
>WENV170634417
FYBJ01001181
46035
Alphaproteobacteria
GGA
Ser
>WENV170634430
FYBJ01001350
46035
Alphaproteobacteria
GGA
Ser
>WENV170634556
FYBJ01002036
653532
Alphaproteobacteria
GTT
Asn
>WENV170634555
FYBJ01002011
653532
Alphaproteobacteria
GTT
Asn
>WENV170634490
FYBJ01001478
653532
Alphaproteobacteria
GTT
Asn
>WENV170634432
FYBJ01001381
653532
Alphaproteobacteria
GTT
Asn
>WENV170634339
FYBJ01000245
673402
Alphaproteobacteria
TTG
Gln
>WENV170634317
FYBJ01000165
273451
Alphaproteobacteria
GTG
His
>WENV170634269
FYBJ01000050
455172
Alphaproteobacteria
GGC
Ala
>WENV170634324
FYBJ01000175
274138
Alphaproteobacteria
CAT
Met
>WENV170634427
FYBJ01001305
46072
Alphaproteobacteria
GCT
Ser
>WENV170634498
FYBJ01001505
655166
Alphaproteobacteria
CAC
Val
>WENV170634521
FYBJ01001667
273803
Alphaproteobacteria
CCT
Arg
>WENV170634511
FYBJ01001572
275157
Alphaproteobacteria
TGG
Pro
>WENV170634365
FYBJ01000411
270796
Alphaproteobacteria
GTC
Asp
>WENV170634403
FYBJ01001017
270796
Alphaproteobacteria
GTC
Asp
>WENV170634404
FYBJ01001017
270796
Alphaproteobacteria
GTC
Asp
>WENV170634421
FYBJ01001209
270796
Alphaproteobacteria
GTC
Asp
>WENV170634422
FYBJ01001209
270796
Alphaproteobacteria
GTC
Asp
>WENV170634533
FYBJ01001783
270796
Alphaproteobacteria
GTC
Asp
>WENV170634534
FYBJ01001783
270796
Alphaproteobacteria
GTC
Asp
>WENV170634434
FYBJ01001386
655361
Alphaproteobacteria
GCC
Gly
>WENV170634550
FYBJ01001910
655271
Alphaproteobacteria
GGT
Thr
>WENV170634271
FYBJ01000061
780346
Alphaproteobacteria
CTG
Gln
>WENV170634484
FYBJ01001451
655822
Alphaproteobacteria
GAC
Val
>WENV170634405
FYBJ01001028
454912
Alphaproteobacteria
GGC
Ala
>WENV170634390
FYBJ01000824
275560
Alphaproteobacteria
ACG
Arg
>WENV170634419
FYBJ01001209
671670
Alphaproteobacteria
CAC
Val
>WENV170634470
FYBJ01001417
671670
Alphaproteobacteria
CAC
Val
>WENV170634493
FYBJ01001489
302244
Alphaproteobacteria
TCT
Arg
>WENV170634519
FYBJ01001628
454914
Alphaproteobacteria
TTT
Lys
>WENV170634522
FYBJ01001670
454914
Alphaproteobacteria
TTT
Lys
>WENV170634559
FYBJ01002107
454914
Alphaproteobacteria
TTT
Lys
>WENV170634570
FYBJ01002184
454914
Alphaproteobacteria
TTT
Lys
>WENV170634426
FYBJ01001300
275152
Alphaproteobacteria
TCT
Arg
>WENV170634398
FYBJ01000955
46034
Alphaproteobacteria
CGA
Ser
>WENV170634252
FYBJ01000026
281029
Alphaproteobacteria
GGG
Pro
>WENV170634411
FYBJ01001103
654103
Alphaproteobacteria
GAA
Phe
>WENV170634531
FYBJ01001749
654103
Alphaproteobacteria
GAA
Phe
>WENV170634561
FYBJ01002139
654103
Alphaproteobacteria
GAA
Phe
>WENV170634272
FYBJ01000061
780039
Alphaproteobacteria
GCA
Cys
>WENV170634424
FYBJ01001254
655823
Alphaproteobacteria
TTG
Gln
>WENV170634349
FYBJ01000314
46069
Alphaproteobacteria
GGA
Ser
>WENV170634477
FYBJ01001439
274130
Alphaproteobacteria
CGG
Pro
>WENV170634505
FYBJ01001556
274130
Alphaproteobacteria
CGG
Pro
>WENV170634353
FYBJ01000328
659578
Alphaproteobacteria
GAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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