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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170634309
FYBJ01000115
486408
Gammaproteobacteria
GTT
Asn
>WENV170634569
FYBJ01002183
86883
Gammaproteobacteria
GGA
Ser
>WENV170634334
FYBJ01000205
272023
Gammaproteobacteria
GAT
Ile
>WENV170634335
FYBJ01000205
474720
Gammaproteobacteria
TGC
Ala
>WENV170634468
FYBJ01001409
112278
Gammaproteobacteria
CAA
Leu
>WENV170634467
FYBJ01001408
481346
Gammaproteobacteria
GTT
Asn
>WENV170634571
FYBJ01002187
275658
Gammaproteobacteria
TGG
Pro
>WENV170634254
FYBJ01000028
273719
Gammaproteobacteria
CAT
Met
>WENV170634450
FYBJ01001402
458525
Gammaproteobacteria
TAC
Val
>WENV170634358
FYBJ01000338
458324
Gammaproteobacteria
CAT
Met
>WENV170634267
FYBJ01000047
780215
Gammaproteobacteria
GCA
Cys
>WENV170634444
FYBJ01001398
275288
Gammaproteobacteria
GTC
Asp
>WENV170634327
FYBJ01000182
454826
Gammaproteobacteria
TAC
Val
>WENV170634329
FYBJ01000182
454826
Gammaproteobacteria
TAC
Val
>WENV170634457
FYBJ01001404
456475
Gammaproteobacteria
GGT
Thr
>WENV170634573
FYBJ01002187
451648
Gammaproteobacteria
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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