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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170635682
JDSH01000041
779604
Gammaproteobacteria
GCA
Cys
>WENV170635719
JDSH01000249
30353
Gammaproteobacteria
GGA
Ser
>WENV170635712
JDSH01000189
452413
Gammaproteobacteria
GGC
Ala
>WENV170635828
JDSH01015243
451780
Gammaproteobacteria
GCC
Gly
>WENV170635837
JDSH01016159
451780
Gammaproteobacteria
GCC
Gly
>WENV170635803
JDSH01006310
451784
Gammaproteobacteria
GAA
Phe
>WENV170635707
JDSH01000129
452416
Gammaproteobacteria
TTT
Lys
>WENV170635706
JDSH01000129
452416
Gammaproteobacteria
TTT
Lys
>WENV170635717
JDSH01000245
275462
Gammaproteobacteria
TCT
Arg
>WENV170635720
JDSH01000254
46215
Gammaproteobacteria
GCT
Ser
>WENV170635688
JDSH01000057
460378
Gammaproteobacteria
TAC
Val
>WENV170635761
JDSH01000949
271456
Gammaproteobacteria
ACG
Arg
>WENV170635787
JDSH01004268
273702
Gammaproteobacteria
GAT
Ile
>WENV170635814
JDSH01011668
273702
Gammaproteobacteria
GAT
Ile
>WENV170635811
JDSH01008470
270872
Gammaproteobacteria
CCG
Arg
>WENV170635817
JDSH01013098
180152
Gammaproteobacteria
TAG
Leu
>WENV170635806
JDSH01007776
463602
Gammaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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