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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170660023
JXWS01093521
186294
Euryarchaeota
GGA
Ser
>WENV170660054
JXWS01117013
241132
Euryarchaeota
TCG
Arg
>WENV170659992
JXWS01073662
241117
Euryarchaeota
CAT
Met
>WENV170659905
JXWS01030402
241145
Euryarchaeota
TTC
Glu
>WENV170659934
JXWS01044956
455594
Euryarchaeota
TGG
Pro
>WENV170660087
JXWS01139147
87279
Euryarchaeota
GAG
Leu
>WENV170659949
JXWS01052865
87288
Euryarchaeota
TAG
Leu
>WENV170659921
JXWS01037910
274421
Euryarchaeota
GTA
Tyr
>WENV170659989
JXWS01073495
455577
Euryarchaeota
CCG
Arg
>WENV170660074
JXWS01129990
780394
Euryarchaeota
CCC
Gly
>WENV170659860
JXWS01012752
241062
Euryarchaeota
TTC
Glu
>WENV170660038
JXWS01104192
241062
Euryarchaeota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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