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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170661167
JXWU01118400
456952
Gammaproteobacteria
CGC
Ala
>WENV170661121
JXWU01108930
271107
Gammaproteobacteria
CAT
Met
>WENV170661294
JXWU01153362
655885
Gammaproteobacteria
CTG
Gln
>WENV170661268
JXWU01147752
45975
Gammaproteobacteria
TGA
Ser
>WENV170660875
JXWU01052134
655884
Gammaproteobacteria
CTC
Glu
>WENV170661172
JXWU01119735
273120
Gammaproteobacteria
CAT
Met
>WENV170660866
JXWU01049670
780704
Gammaproteobacteria
GCA
Cys
>WENV170660946
JXWU01066794
454968
Gammaproteobacteria
TAC
Val
>WENV170660947
JXWU01066794
273852
Gammaproteobacteria
GTC
Asp
>WENV170660621
JXWU01004775
180128
Gammaproteobacteria
CAA
Leu
>WENV170661295
JXWU01153362
655379
Gammaproteobacteria
CTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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