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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170668279
LADL02002429
218595
Alphaproteobacteria
CAA
Leu
>WENV170668027
LADL02000300
454566
Alphaproteobacteria
GAA
Phe
>WENV170668336
LADL02003030
655167
Alphaproteobacteria
TTC
Glu
>WENV170668072
LADL02000799
273805
Alphaproteobacteria
ACG
Arg
>WENV170668397
LADL02003509
270892
Alphaproteobacteria
CGG
Pro
>WENV170668125
LADL02001251
655623
Alphaproteobacteria
GCC
Gly
>WENV170668124
LADL02001240
455330
Alphaproteobacteria
CCA
Trp
>WENV170668097
LADL02001019
780884
Alphaproteobacteria
CTG
Gln
>WENV170668247
LADL02002115
321511
Alphaproteobacteria
CAT
Met
>WENV170668260
LADL02002197
468172
Alphaproteobacteria
TGC
Ala
>WENV170668334
LADL02003009
180507
Alphaproteobacteria
TAG
Leu
>WENV170668293
LADL02002551
653532
Alphaproteobacteria
GTT
Asn
>WENV170668369
LADL02003291
788369
Alphaproteobacteria
CCC
Gly
>WENV170668258
LADL02002177
273801
Alphaproteobacteria
GTG
His
>WENV170668315
LADL02002770
653591
Alphaproteobacteria
TTG
Gln
>WENV170668095
LADL02001003
270896
Alphaproteobacteria
CCG
Arg
>WENV170668021
LADL02000224
654986
Alphaproteobacteria
GCC
Gly
>WENV170668046
LADL02000502
287552
Alphaproteobacteria
GAT
Ile
>WENV170668116
LADL02001128
274998
Alphaproteobacteria
TCT
Arg
>WENV170668394
LADL02003473
274107
Alphaproteobacteria
CCT
Arg
>WENV170668325
LADL02002910
275157
Alphaproteobacteria
TGG
Pro
>WENV170668115
LADL02001128
273603
Alphaproteobacteria
TGG
Pro
>WENV170668058
LADL02000596
279474
Alphaproteobacteria
GTC
Asp
>WENV170668039
LADL02000428
655271
Alphaproteobacteria
GGT
Thr
>WENV170668378
LADL02003416
655822
Alphaproteobacteria
GAC
Val
>WENV170668404
LADL02003535
660487
Alphaproteobacteria
GCC
Gly
>WENV170668337
LADL02003039
485258
Alphaproteobacteria
GGC
Ala
>WENV170668351
LADL02003156
112802
Alphaproteobacteria
GAG
Leu
>WENV170668113
LADL02001128
653586
Alphaproteobacteria
TTC
Glu
>WENV170668114
LADL02001128
653586
Alphaproteobacteria
TTC
Glu
>WENV170668177
LADL02001608
281027
Alphaproteobacteria
CCT
Arg
>WENV170668096
LADL02001014
275989
Alphaproteobacteria
CAT
Met
>WENV170668296
LADL02002579
779596
Alphaproteobacteria
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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