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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170669539
LAHS01000455
273008
Alphaproteobacteria
CAT
Met
>WENV170669499
LAHS01000342
453942
Alphaproteobacteria
CGC
Ala
>WENV170669769
LAHS01002394
30439
Alphaproteobacteria
GGA
Ser
>WENV170669383
LAHS01000063
273012
Alphaproteobacteria
ACG
Arg
>WENV170669346
LAHS01000016
453950
Alphaproteobacteria
GTT
Asn
>WENV170670056
LAHS01022372
454054
Alphaproteobacteria
TGC
Ala
>WENV170669501
LAHS01000362
272978
Alphaproteobacteria
CGG
Pro
>WENV170669496
LAHS01000342
779994
Alphaproteobacteria
CCC
Gly
>WENV170669480
LAHS01000332
656341
Alphaproteobacteria
TAC
Val
>WENV170669627
LAHS01000929
653941
Alphaproteobacteria
CAC
Val
>WENV170669350
LAHS01000016
453982
Alphaproteobacteria
GAA
Phe
>WENV170669380
LAHS01000063
453943
Alphaproteobacteria
CGT
Thr
>WENV170669649
LAHS01001063
160578
Alphaproteobacteria
GAG
Leu
>WENV170669549
LAHS01000533
272979
Alphaproteobacteria
GAT
Ile
>WENV170670170
LAHS01080468
780024
Alphaproteobacteria
GCA
Cys
>WENV170669504
LAHS01000362
654686
Alphaproteobacteria
TGT
Thr
>WENV170669650
LAHS01001063
656342
Alphaproteobacteria
CAT
Met
>WENV170669503
LAHS01000362
654681
Alphaproteobacteria
GCC
Gly
>WENV170669506
LAHS01000362
485412
Alphaproteobacteria
GGC
Ala
>WENV170669505
LAHS01000362
654687
Alphaproteobacteria
TTG
Gln
>WENV170669500
LAHS01000362
654685
Alphaproteobacteria
GGT
Thr
>WENV170669540
LAHS01000455
654682
Alphaproteobacteria
GAC
Val
>WENV170669476
LAHS01000332
273010
Alphaproteobacteria
TGG
Pro
>WENV170669478
LAHS01000332
272980
Alphaproteobacteria
GGG
Pro
>WENV170669379
LAHS01000063
453944
Alphaproteobacteria
TTC
Glu
>WENV170669551
LAHS01000534
336114
Alphaproteobacteria
CAT
Met
>WENV170669738
LAHS01002018
780825
Alphaproteobacteria
CTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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