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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170670640
LAHT01099257
243681
Euryarchaeota
CAT
Met
>WENV170670349
LAHT01002967
655782
Euryarchaeota
GCC
Gly
>WENV170670484
LAHT01018084
655782
Euryarchaeota
GCC
Gly
>WENV170670651
LAHT01107586
274633
Euryarchaeota
GCC
Gly
>WENV170670343
LAHT01002836
87401
Euryarchaeota
GCT
Ser
>WENV170670274
LAHT01000923
456306
Euryarchaeota
GTT
Asn
>WENV170670367
LAHT01003951
456306
Euryarchaeota
GTT
Asn
>WENV170670452
LAHT01012359
456306
Euryarchaeota
GTT
Asn
>WENV170670510
LAHT01027524
456306
Euryarchaeota
GTT
Asn
>WENV170670569
LAHT01051384
154184
Euryarchaeota
CAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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