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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
110 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170672453
LAZR01000181
273758
Gammaproteobacteria
GAC
Val
>WENV170672788
LAZR01002076
273758
Gammaproteobacteria
GAC
Val
>WENV170672635
LAZR01000570
454866
Gammaproteobacteria
TAC
Val
>WENV170672150
LAZR01000007
273854
Gammaproteobacteria
CAT
Met
>WENV170672440
LAZR01000159
273854
Gammaproteobacteria
CAT
Met
>WENV170672761
LAZR01001604
486408
Gammaproteobacteria
GTT
Asn
>WENV170673022
LAZR01004595
275465
Gammaproteobacteria
GAC
Val
>WENV170672137
LAZR01000005
455342
Gammaproteobacteria
TTC
Glu
>WENV170672384
LAZR01000096
273856
Gammaproteobacteria
GAC
Val
>WENV170672706
LAZR01001022
185700
Gammaproteobacteria
TAG
Leu
>WENV170672708
LAZR01001022
185700
Gammaproteobacteria
TAG
Leu
>WENV170673695
LAZR01023324
270982
Gammaproteobacteria
GAT
Ile
>WENV170673326
LAZR01011606
270982
Gammaproteobacteria
GAT
Ile
>WENV170673323
LAZR01011557
270982
Gammaproteobacteria
GAT
Ile
>WENV170673311
LAZR01011181
270982
Gammaproteobacteria
GAT
Ile
>WENV170673180
LAZR01007829
270982
Gammaproteobacteria
GAT
Ile
>WENV170673134
LAZR01007014
270982
Gammaproteobacteria
GAT
Ile
>WENV170673778
LAZR01028306
653834
Gammaproteobacteria
TCC
Gly
>WENV170672865
LAZR01002795
451916
Gammaproteobacteria
TTC
Glu
>WENV170672370
LAZR01000082
456706
Gammaproteobacteria
TGT
Thr
>WENV170672156
LAZR01000010
456706
Gammaproteobacteria
TGT
Thr
>WENV170672337
LAZR01000064
454967
Gammaproteobacteria
TTT
Lys
>WENV170672338
LAZR01000064
454967
Gammaproteobacteria
TTT
Lys
>WENV170673683
LAZR01022913
454388
Gammaproteobacteria
TAC
Val
>WENV170672109
LAZR01000002
281115
Gammaproteobacteria
GAT
Ile
>WENV170673116
LAZR01006669
504629
Gammaproteobacteria
TTT
Lys
>WENV170673072
LAZR01005633
454857
Gammaproteobacteria
GTG
His
>WENV170673056
LAZR01005235
655146
Gammaproteobacteria
CCG
Arg
>WENV170672818
LAZR01002521
273755
Gammaproteobacteria
CAT
Met
>WENV170673696
LAZR01023324
474720
Gammaproteobacteria
TGC
Ala
>WENV170673324
LAZR01011557
474720
Gammaproteobacteria
TGC
Ala
>WENV170673312
LAZR01011181
474720
Gammaproteobacteria
TGC
Ala
>WENV170672707
LAZR01001022
655147
Gammaproteobacteria
TTG
Gln
>WENV170672709
LAZR01001022
655147
Gammaproteobacteria
TTG
Gln
>WENV170672623
LAZR01000484
12370
Gammaproteobacteria
GCT
Ser
>WENV170674498
LAZR01070322
12370
Gammaproteobacteria
GCT
Ser
>WENV170673219
LAZR01008763
454856
Gammaproteobacteria
GCC
Gly
>WENV170673221
LAZR01008763
454856
Gammaproteobacteria
GCC
Gly
>WENV170673403
LAZR01013403
454856
Gammaproteobacteria
GCC
Gly
>WENV170672165
LAZR01000012
273847
Gammaproteobacteria
CCT
Arg
>WENV170672798
LAZR01002250
455999
Gammaproteobacteria
GAA
Phe
>WENV170672252
LAZR01000037
273857
Gammaproteobacteria
TGG
Pro
>WENV170674479
LAZR01069325
274776
Gammaproteobacteria
GGG
Pro
>WENV170672786
LAZR01002049
273756
Gammaproteobacteria
TGG
Pro
>WENV170673811
LAZR01029437
273749
Gammaproteobacteria
CCA
Trp
>WENV170674224
LAZR01051831
483386
Gammaproteobacteria
GGC
Ala
>WENV170672152
LAZR01000007
273853
Gammaproteobacteria
CAT
Met
>WENV170673220
LAZR01008763
112792
Gammaproteobacteria
TAA
Leu
>WENV170673222
LAZR01008763
112792
Gammaproteobacteria
TAA
Leu
>WENV170672186
LAZR01000024
452332
Gammaproteobacteria
GTG
His
>WENV170672305
LAZR01000056
274209
Gammaproteobacteria
ACG
Arg
>WENV170672149
LAZR01000007
655197
Gammaproteobacteria
TTG
Gln
>WENV170672548
LAZR01000294
655197
Gammaproteobacteria
TTG
Gln
>WENV170673032
LAZR01004761
113284
Gammaproteobacteria
CAG
Leu
>WENV170674499
LAZR01070322
274777
Gammaproteobacteria
ACG
Arg
>WENV170672938
LAZR01003496
271460
Gammaproteobacteria
CGG
Pro
>WENV170673959
LAZR01037196
454855
Gammaproteobacteria
GCC
Gly
>WENV170673776
LAZR01028306
452404
Gammaproteobacteria
TGT
Thr
>WENV170672112
LAZR01000002
273851
Gammaproteobacteria
GTC
Asp
>WENV170672255
LAZR01000037
180498
Gammaproteobacteria
TAG
Leu
>WENV170672547
LAZR01000294
454424
Gammaproteobacteria
GAA
Phe
>WENV170672589
LAZR01000416
30612
Gammaproteobacteria
TGA
Ser
>WENV170672620
LAZR01000484
30612
Gammaproteobacteria
TGA
Ser
>WENV170672621
LAZR01000484
30612
Gammaproteobacteria
TGA
Ser
>WENV170672622
LAZR01000484
30612
Gammaproteobacteria
TGA
Ser
>WENV170672651
LAZR01000595
30612
Gammaproteobacteria
TGA
Ser
>WENV170672636
LAZR01000570
454864
Gammaproteobacteria
TAC
Val
>WENV170672637
LAZR01000570
454864
Gammaproteobacteria
TAC
Val
>WENV170672638
LAZR01000570
454864
Gammaproteobacteria
TAC
Val
>WENV170672467
LAZR01000207
454968
Gammaproteobacteria
TAC
Val
>WENV170672687
LAZR01000886
273754
Gammaproteobacteria
GTT
Asn
>WENV170674092
LAZR01043591
464808
Gammaproteobacteria
TTT
Lys
>WENV170673073
LAZR01005657
180479
Gammaproteobacteria
CAA
Leu
>WENV170672367
LAZR01000081
780241
Gammaproteobacteria
GCA
Cys
>WENV170672153
LAZR01000007
454969
Gammaproteobacteria
GTT
Asn
>WENV170674056
LAZR01041509
454969
Gammaproteobacteria
GTT
Asn
>WENV170674057
LAZR01041509
454969
Gammaproteobacteria
GTT
Asn
>WENV170674058
LAZR01041509
454969
Gammaproteobacteria
GTT
Asn
>WENV170674059
LAZR01041509
454969
Gammaproteobacteria
GTT
Asn
>WENV170674060
LAZR01041509
454969
Gammaproteobacteria
GTT
Asn
>WENV170674061
LAZR01041509
454969
Gammaproteobacteria
GTT
Asn
>WENV170674062
LAZR01041509
454969
Gammaproteobacteria
GTT
Asn
>WENV170674063
LAZR01041509
454969
Gammaproteobacteria
GTT
Asn
>WENV170674064
LAZR01041509
454969
Gammaproteobacteria
GTT
Asn
>WENV170674065
LAZR01041509
454969
Gammaproteobacteria
GTT
Asn
>WENV170672145
LAZR01000006
271613
Gammaproteobacteria
GTC
Asp
>WENV170672193
LAZR01000024
271613
Gammaproteobacteria
GTC
Asp
>WENV170672246
LAZR01000035
271613
Gammaproteobacteria
GTC
Asp
>WENV170672347
LAZR01000070
271613
Gammaproteobacteria
GTC
Asp
>WENV170672136
LAZR01000005
655385
Gammaproteobacteria
GCC
Gly
>WENV170672138
LAZR01000005
655385
Gammaproteobacteria
GCC
Gly
>WENV170672366
LAZR01000081
655385
Gammaproteobacteria
GCC
Gly
>WENV170674370
LAZR01060647
452602
Gammaproteobacteria
TGC
Ala
>WENV170673051
LAZR01004983
452410
Gammaproteobacteria
TAC
Val
>WENV170672805
LAZR01002321
666267
Gammaproteobacteria
CCT
Arg
>WENV170672151
LAZR01000007
273852
Gammaproteobacteria
GTC
Asp
>WENV170672468
LAZR01000207
273852
Gammaproteobacteria
GTC
Asp
>WENV170672469
LAZR01000207
273852
Gammaproteobacteria
GTC
Asp
>WENV170672371
LAZR01000083
112884
Gammaproteobacteria
CAG
Leu
>WENV170672356
LAZR01000076
112814
Gammaproteobacteria
GAG
Leu
>WENV170673777
LAZR01028306
218035
Gammaproteobacteria
GTA
Tyr
>WENV170672293
LAZR01000053
655194
Gammaproteobacteria
GGT
Thr
>WENV170672251
LAZR01000037
274204
Gammaproteobacteria
GGG
Pro
>WENV170672134
LAZR01000005
454964
Gammaproteobacteria
TTC
Glu
>WENV170672135
LAZR01000005
454964
Gammaproteobacteria
TTC
Glu
>WENV170672797
LAZR01002250
454860
Gammaproteobacteria
TGT
Thr
>WENV170672799
LAZR01002250
454860
Gammaproteobacteria
TGT
Thr
>WENV170672175
LAZR01000018
271253
Gammaproteobacteria
CAT
Met
>WENV170672357
LAZR01000076
271253
Gammaproteobacteria
CAT
Met
>WENV170672868
LAZR01002814
451920
Gammaproteobacteria
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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