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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
9 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170675046
LCWZ01001853
465413
Alphaproteobacteria
TGC
Ala
>WENV170675367
LCWZ01049356
456891
Alphaproteobacteria
CGT
Thr
>WENV170675517
LCWZ01106430
456891
Alphaproteobacteria
CGT
Thr
>WENV170675530
LCWZ01112052
456891
Alphaproteobacteria
CGT
Thr
>WENV170675197
LCWZ01014871
659477
Alphaproteobacteria
GGT
Thr
>WENV170675529
LCWZ01111899
454701
Alphaproteobacteria
GAA
Phe
>WENV170675482
LCWZ01090305
655625
Alphaproteobacteria
TTC
Glu
>WENV170675522
LCWZ01109918
270799
Alphaproteobacteria
CAT
Met
>WENV170675531
LCWZ01112487
654103
Alphaproteobacteria
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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