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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170675605
LDZP01000089
273854
Gammaproteobacteria
CAT
Met
>WENV170675620
LDZP01000146
273854
Gammaproteobacteria
CAT
Met
>WENV170675576
LDZP01000076
455342
Gammaproteobacteria
TTC
Glu
>WENV170675611
LDZP01000093
273856
Gammaproteobacteria
GAC
Val
>WENV170675612
LDZP01000093
273856
Gammaproteobacteria
GAC
Val
>WENV170675593
LDZP01000083
112813
Gammaproteobacteria
CAG
Leu
>WENV170675565
LDZP01000074
273847
Gammaproteobacteria
CCT
Arg
>WENV170675583
LDZP01000078
273857
Gammaproteobacteria
TGG
Pro
>WENV170675566
LDZP01000075
273853
Gammaproteobacteria
CAT
Met
>WENV170675606
LDZP01000091
114536
Gammaproteobacteria
CAA
Leu
>WENV170675568
LDZP01000075
274209
Gammaproteobacteria
ACG
Arg
>WENV170675569
LDZP01000075
274209
Gammaproteobacteria
ACG
Arg
>WENV170675604
LDZP01000089
655197
Gammaproteobacteria
TTG
Gln
>WENV170675617
LDZP01000113
655197
Gammaproteobacteria
TTG
Gln
>WENV170675597
LDZP01000084
273851
Gammaproteobacteria
GTC
Asp
>WENV170675598
LDZP01000084
273851
Gammaproteobacteria
GTC
Asp
>WENV170675600
LDZP01000084
273851
Gammaproteobacteria
GTC
Asp
>WENV170675589
LDZP01000081
180498
Gammaproteobacteria
TAG
Leu
>WENV170675616
LDZP01000113
454424
Gammaproteobacteria
GAA
Phe
>WENV170675588
LDZP01000080
273859
Gammaproteobacteria
CGG
Pro
>WENV170675596
LDZP01000084
454968
Gammaproteobacteria
TAC
Val
>WENV170675609
LDZP01000092
780241
Gammaproteobacteria
GCA
Cys
>WENV170675601
LDZP01000089
454969
Gammaproteobacteria
GTT
Asn
>WENV170675602
LDZP01000089
454969
Gammaproteobacteria
GTT
Asn
>WENV170675603
LDZP01000089
454969
Gammaproteobacteria
GTT
Asn
>WENV170675573
LDZP01000076
655385
Gammaproteobacteria
GCC
Gly
>WENV170675575
LDZP01000076
655385
Gammaproteobacteria
GCC
Gly
>WENV170675577
LDZP01000076
655385
Gammaproteobacteria
GCC
Gly
>WENV170675608
LDZP01000092
655385
Gammaproteobacteria
GCC
Gly
>WENV170675591
LDZP01000083
112884
Gammaproteobacteria
CAG
Leu
>WENV170675614
LDZP01000100
112814
Gammaproteobacteria
GAG
Leu
>WENV170675581
LDZP01000077
655194
Gammaproteobacteria
GGT
Thr
>WENV170675590
LDZP01000081
274204
Gammaproteobacteria
GGG
Pro
>WENV170675571
LDZP01000076
454964
Gammaproteobacteria
TTC
Glu
>WENV170675572
LDZP01000076
454964
Gammaproteobacteria
TTC
Glu
>WENV170675574
LDZP01000076
454964
Gammaproteobacteria
TTC
Glu
>WENV170675587
LDZP01000079
271253
Gammaproteobacteria
CAT
Met
>WENV170675615
LDZP01000100
271253
Gammaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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