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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170692742
LGOV01025882
273854
Gammaproteobacteria
CAT
Met
>WENV170692793
LGOV01031401
273856
Gammaproteobacteria
GAC
Val
>WENV170692231
LGOV01001383
112813
Gammaproteobacteria
CAG
Leu
>WENV170692396
LGOV01005533
655386
Gammaproteobacteria
TTG
Gln
>WENV170692464
LGOV01008411
12379
Gammaproteobacteria
GCT
Ser
>WENV170692465
LGOV01008411
274209
Gammaproteobacteria
ACG
Arg
>WENV170692466
LGOV01008411
274209
Gammaproteobacteria
ACG
Arg
>WENV170692379
LGOV01004933
655197
Gammaproteobacteria
TTG
Gln
>WENV170692212
LGOV01000921
218101
Gammaproteobacteria
GTA
Tyr
>WENV170692503
LGOV01010979
30520
Gammaproteobacteria
TGA
Ser
>WENV170692805
LGOV01032307
180498
Gammaproteobacteria
TAG
Leu
>WENV170692728
LGOV01024462
273859
Gammaproteobacteria
CGG
Pro
>WENV170692213
LGOV01000921
780101
Gammaproteobacteria
TCC
Gly
>WENV170692298
LGOV01002474
454968
Gammaproteobacteria
TAC
Val
>WENV170692301
LGOV01002474
454968
Gammaproteobacteria
TAC
Val
>WENV170692486
LGOV01009707
780241
Gammaproteobacteria
GCA
Cys
>WENV170692743
LGOV01025882
454969
Gammaproteobacteria
GTT
Asn
>WENV170692485
LGOV01009707
655385
Gammaproteobacteria
GCC
Gly
>WENV170692299
LGOV01002474
273852
Gammaproteobacteria
GTC
Asp
>WENV170692300
LGOV01002474
273852
Gammaproteobacteria
GTC
Asp
>WENV170692302
LGOV01002474
273852
Gammaproteobacteria
GTC
Asp
>WENV170692214
LGOV01000921
655194
Gammaproteobacteria
GGT
Thr
>WENV170692804
LGOV01032307
274204
Gammaproteobacteria
GGG
Pro
>WENV170692584
LGOV01015161
454964
Gammaproteobacteria
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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