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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
76 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170700168
LIDZ01005649
271411
Gammaproteobacteria
GGG
Pro
>WENV170700428
LIDZ01013815
271411
Gammaproteobacteria
GGG
Pro
>WENV170700417
LIDZ01013651
271453
Gammaproteobacteria
GGG
Pro
>WENV170700520
LIDZ01014977
453995
Gammaproteobacteria
GTG
His
>WENV170700543
LIDZ01015192
273024
Gammaproteobacteria
CAT
Met
>WENV170700449
LIDZ01013989
271725
Gammaproteobacteria
CAT
Met
>WENV170700304
LIDZ01011521
153696
Gammaproteobacteria
TAA
Leu
>WENV170700560
LIDZ01015388
455856
Gammaproteobacteria
TGT
Thr
>WENV170700154
LIDZ01004176
654015
Gammaproteobacteria
TTG
Gln
>WENV170700155
LIDZ01004176
654015
Gammaproteobacteria
TTG
Gln
>WENV170700185
LIDZ01006827
654015
Gammaproteobacteria
TTG
Gln
>WENV170700106
LIDZ01002639
275473
Gammaproteobacteria
GGG
Pro
>WENV170700392
LIDZ01013307
455188
Gammaproteobacteria
TAC
Val
>WENV170700184
LIDZ01006827
270578
Gammaproteobacteria
CAT
Met
>WENV170700186
LIDZ01006827
270578
Gammaproteobacteria
CAT
Met
>WENV170700150
LIDZ01004099
452750
Gammaproteobacteria
GAA
Phe
>WENV170700162
LIDZ01004614
452750
Gammaproteobacteria
GAA
Phe
>WENV170700605
LIDZ01015708
180135
Gammaproteobacteria
CAA
Leu
>WENV170700389
LIDZ01013168
180136
Gammaproteobacteria
CAA
Leu
>WENV170700309
LIDZ01011724
452337
Gammaproteobacteria
GTT
Asn
>WENV170700540
LIDZ01015155
452337
Gammaproteobacteria
GTT
Asn
>WENV170700558
LIDZ01015380
452337
Gammaproteobacteria
GTT
Asn
>WENV170700115
LIDZ01002944
271529
Gammaproteobacteria
GAC
Val
>WENV170700117
LIDZ01002944
271529
Gammaproteobacteria
GAC
Val
>WENV170700134
LIDZ01003022
654016
Gammaproteobacteria
CTG
Gln
>WENV170700156
LIDZ01004176
654016
Gammaproteobacteria
CTG
Gln
>WENV170700187
LIDZ01006827
654016
Gammaproteobacteria
CTG
Gln
>WENV170700188
LIDZ01006827
654016
Gammaproteobacteria
CTG
Gln
>WENV170700284
LIDZ01010394
273023
Gammaproteobacteria
CAT
Met
>WENV170700261
LIDZ01010040
275472
Gammaproteobacteria
TCT
Arg
>WENV170700087
LIDZ01001432
114323
Gammaproteobacteria
GAG
Leu
>WENV170700055
LIDZ01000623
452752
Gammaproteobacteria
TAC
Val
>WENV170700056
LIDZ01000623
452752
Gammaproteobacteria
TAC
Val
>WENV170700133
LIDZ01003022
275718
Gammaproteobacteria
CAT
Met
>WENV170700071
LIDZ01001099
12238
Gammaproteobacteria
GCT
Ser
>WENV170700080
LIDZ01001163
112426
Gammaproteobacteria
CAG
Leu
>WENV170700169
LIDZ01005670
112426
Gammaproteobacteria
CAG
Leu
>WENV170700324
LIDZ01012408
86977
Gammaproteobacteria
GGA
Ser
>WENV170700289
LIDZ01010902
780010
Gammaproteobacteria
CCC
Gly
>WENV170700290
LIDZ01010997
780010
Gammaproteobacteria
CCC
Gly
>WENV170700456
LIDZ01014242
780010
Gammaproteobacteria
CCC
Gly
>WENV170700619
LIDZ01015773
780010
Gammaproteobacteria
CCC
Gly
>WENV170700288
LIDZ01010871
87120
Gammaproteobacteria
TGA
Ser
>WENV170700299
LIDZ01011482
87120
Gammaproteobacteria
TGA
Ser
>WENV170700450
LIDZ01014012
87120
Gammaproteobacteria
TGA
Ser
>WENV170700576
LIDZ01015607
656971
Gammaproteobacteria
TTG
Gln
>WENV170700416
LIDZ01013577
45906
Gammaproteobacteria
GGA
Ser
>WENV170700100
LIDZ01001855
113140
Gammaproteobacteria
TAA
Leu
>WENV170700296
LIDZ01011453
458328
Gammaproteobacteria
GAA
Phe
>WENV170700069
LIDZ01001094
88106
Gammaproteobacteria
GGA
Ser
>WENV170700167
LIDZ01005507
87454
Gammaproteobacteria
GGA
Ser
>WENV170700182
LIDZ01006725
653890
Gammaproteobacteria
CCT
Arg
>WENV170700223
LIDZ01008572
653890
Gammaproteobacteria
CCT
Arg
>WENV170700173
LIDZ01005698
654703
Gammaproteobacteria
CCT
Arg
>WENV170700199
LIDZ01007326
654703
Gammaproteobacteria
CCT
Arg
>WENV170700081
LIDZ01001163
112427
Gammaproteobacteria
CAG
Leu
>WENV170700096
LIDZ01001807
112427
Gammaproteobacteria
CAG
Leu
>WENV170700387
LIDZ01013168
112427
Gammaproteobacteria
CAG
Leu
>WENV170700388
LIDZ01013168
112427
Gammaproteobacteria
CAG
Leu
>WENV170700170
LIDZ01005670
112262
Gammaproteobacteria
CAG
Leu
>WENV170700402
LIDZ01013414
12330
Gammaproteobacteria
GCT
Ser
>WENV170700099
LIDZ01001855
779672
Gammaproteobacteria
GCA
Cys
>WENV170700102
LIDZ01002273
180782
Gammaproteobacteria
CAA
Leu
>WENV170700176
LIDZ01005758
180782
Gammaproteobacteria
CAA
Leu
>WENV170700529
LIDZ01015061
113151
Gammaproteobacteria
CAG
Leu
>WENV170700530
LIDZ01015061
113151
Gammaproteobacteria
CAG
Leu
>WENV170700067
LIDZ01000898
180098
Gammaproteobacteria
GTA
Tyr
>WENV170700107
LIDZ01002764
180098
Gammaproteobacteria
GTA
Tyr
>WENV170700108
LIDZ01002764
180098
Gammaproteobacteria
GTA
Tyr
>WENV170700161
LIDZ01004539
180098
Gammaproteobacteria
GTA
Tyr
>WENV170700189
LIDZ01006889
180098
Gammaproteobacteria
GTA
Tyr
>WENV170700066
LIDZ01000898
452504
Gammaproteobacteria
TGT
Thr
>WENV170700147
LIDZ01004067
452504
Gammaproteobacteria
TGT
Thr
>WENV170700372
LIDZ01012780
452504
Gammaproteobacteria
TGT
Thr
>WENV170700159
LIDZ01004259
273025
Gammaproteobacteria
CCT
Arg
>WENV170700391
LIDZ01013307
46251
Gammaproteobacteria
CGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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