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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180040846
LLBZ010017150
452757
Alphaproteobacteria
CAT
Met
>WENV180041178
LLBZ010059016
218187
Alphaproteobacteria
GTA
Tyr
>WENV180040737
LLBZ010009862
154277
Alphaproteobacteria
GTA
Tyr
>WENV180041014
LLBZ010034045
454180
Alphaproteobacteria
CGT
Thr
>WENV180040713
LLBZ010008500
281747
Alphaproteobacteria
CCT
Arg
>WENV180041307
LLBZ010091197
153953
Alphaproteobacteria
TAA
Leu
>WENV180041088
LLBZ010043154
451742
Alphaproteobacteria
GGC
Ala
>WENV180041089
LLBZ010043154
451742
Alphaproteobacteria
GGC
Ala
>WENV180041940
LLBZ010762567
451742
Alphaproteobacteria
GGC
Ala
>WENV180041130
LLBZ010049520
653532
Alphaproteobacteria
GTT
Asn
>WENV180040630
LLBZ010002958
180320
Alphaproteobacteria
TAG
Leu
>WENV180041139
LLBZ010051270
654792
Alphaproteobacteria
GGT
Thr
>WENV180041041
LLBZ010037046
655625
Alphaproteobacteria
TTC
Glu
>WENV180040663
LLBZ010005284
653931
Alphaproteobacteria
GTT
Asn
>WENV180041437
LLBZ010133746
273909
Alphaproteobacteria
TCT
Arg
>WENV180040741
LLBZ010010250
654791
Alphaproteobacteria
CTC
Glu
>WENV180040895
LLBZ010021921
780039
Alphaproteobacteria
GCA
Cys
>WENV180040939
LLBZ010026323
780039
Alphaproteobacteria
GCA
Cys
>WENV180041243
LLBZ010073609
780039
Alphaproteobacteria
GCA
Cys
>WENV180040789
LLBZ010014703
452566
Alphaproteobacteria
TTT
Lys
>WENV180040634
LLBZ010003295
656202
Alphaproteobacteria
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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