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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170704619
LLEL01010843
454805
Gammaproteobacteria
GCC
Gly
>WENV170704675
LLEL01031566
454805
Gammaproteobacteria
GCC
Gly
>WENV170704594
LLEL01005298
455342
Gammaproteobacteria
TTC
Glu
>WENV170704682
LLEL01034498
455342
Gammaproteobacteria
TTC
Glu
>WENV170704621
LLEL01011868
87529
Gammaproteobacteria
GGA
Ser
>WENV170704665
LLEL01026903
655113
Gammaproteobacteria
TTG
Gln
>WENV170704647
LLEL01019273
180468
Gammaproteobacteria
TAG
Leu
>WENV170704664
LLEL01026903
180468
Gammaproteobacteria
TAG
Leu
>WENV170704591
LLEL01003711
274986
Gammaproteobacteria
CAT
Met
>WENV170704616
LLEL01009792
274986
Gammaproteobacteria
CAT
Met
>WENV170704684
LLEL01035392
30510
Gammaproteobacteria
GGA
Ser
>WENV170704618
LLEL01010843
779470
Gammaproteobacteria
GCA
Cys
>WENV170704615
LLEL01009348
452899
Gammaproteobacteria
TAC
Val
>WENV170704642
LLEL01018961
273697
Gammaproteobacteria
CAT
Met
>WENV170704646
LLEL01019273
279344
Gammaproteobacteria
CAT
Met
>WENV170704600
LLEL01007191
452881
Gammaproteobacteria
TGT
Thr
>WENV170704624
LLEL01012087
270822
Gammaproteobacteria
CCA
Trp
>WENV170704685
LLEL01035867
277966
Gammaproteobacteria
CAT
Met
>WENV170704686
LLEL01036206
180469
Gammaproteobacteria
GTA
Tyr
>WENV170704668
LLEL01028408
279312
Gammaproteobacteria
GAT
Ile
>WENV170704655
LLEL01023449
270929
Gammaproteobacteria
GAT
Ile
>WENV170704651
LLEL01021831
451837
Gammaproteobacteria
TTC
Glu
>WENV170704632
LLEL01015543
454806
Gammaproteobacteria
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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