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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170705508
LNAO01001278
273483
Betaproteobacteria
ACG
Arg
>WENV170705418
LNAO01000260
655629
Betaproteobacteria
CAC
Val
>WENV170705491
LNAO01001051
655109
Betaproteobacteria
CAC
Val
>WENV170705513
LNAO01001476
180380
Betaproteobacteria
CAG
Leu
>WENV170705514
LNAO01001476
180380
Betaproteobacteria
CAG
Leu
>WENV170705486
LNAO01000978
276280
Betaproteobacteria
CAT
Met
>WENV170705511
LNAO01001409
45973
Betaproteobacteria
CGA
Ser
>WENV170705389
LNAO01000032
780579
Betaproteobacteria
GCA
Cys
>WENV170705542
LNAO01002103
780144
Betaproteobacteria
GCA
Cys
>WENV170705544
LNAO01002141
780144
Betaproteobacteria
GCA
Cys
>WENV170705388
LNAO01000032
454453
Betaproteobacteria
GCC
Gly
>WENV170705504
LNAO01001207
454453
Betaproteobacteria
GCC
Gly
>WENV170705526
LNAO01001686
454453
Betaproteobacteria
GCC
Gly
>WENV170705541
LNAO01002103
487621
Betaproteobacteria
GCC
Gly
>WENV170705471
LNAO01000833
452596
Betaproteobacteria
GTT
Asn
>WENV170705472
LNAO01000833
452596
Betaproteobacteria
GTT
Asn
>WENV170705480
LNAO01000896
457105
Betaproteobacteria
TAC
Val
>WENV170705502
LNAO01001148
180273
Betaproteobacteria
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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