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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
103 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170706569
LNAP01004305
780123
Alphaproteobacteria
CTG
Gln
>WENV170706977
LNAP01010207
780123
Alphaproteobacteria
CTG
Gln
>WENV170705935
LNAP01000679
273438
Alphaproteobacteria
TGG
Pro
>WENV170706669
LNAP01005321
273438
Alphaproteobacteria
TGG
Pro
>WENV170706932
LNAP01009174
273438
Alphaproteobacteria
TGG
Pro
>WENV170708397
LNAP01077943
180577
Alphaproteobacteria
TAG
Leu
>WENV170705848
LNAP01000483
780126
Alphaproteobacteria
GCA
Cys
>WENV170706180
LNAP01001556
454482
Alphaproteobacteria
CCA
Trp
>WENV170706399
LNAP01002834
454482
Alphaproteobacteria
CCA
Trp
>WENV170706633
LNAP01004942
454482
Alphaproteobacteria
CCA
Trp
>WENV170706123
LNAP01001231
113518
Alphaproteobacteria
CAG
Leu
>WENV170708418
LNAP01079707
154277
Alphaproteobacteria
GTA
Tyr
>WENV170705620
LNAP01000024
654953
Alphaproteobacteria
GGT
Thr
>WENV170706081
LNAP01001046
654953
Alphaproteobacteria
GGT
Thr
>WENV170706434
LNAP01003131
654953
Alphaproteobacteria
GGT
Thr
>WENV170706021
LNAP01000861
282062
Alphaproteobacteria
GTC
Asp
>WENV170707416
LNAP01020032
12502
Alphaproteobacteria
GCT
Ser
>WENV170705697
LNAP01000143
653784
Alphaproteobacteria
CAT
Met
>WENV170705919
LNAP01000619
180388
Alphaproteobacteria
TAG
Leu
>WENV170707469
LNAP01021965
180388
Alphaproteobacteria
TAG
Leu
>WENV170708379
LNAP01075372
180388
Alphaproteobacteria
TAG
Leu
>WENV170706202
LNAP01001657
276128
Alphaproteobacteria
CCT
Arg
>WENV170707332
LNAP01017773
276128
Alphaproteobacteria
CCT
Arg
>WENV170705830
LNAP01000421
457350
Alphaproteobacteria
CTT
Lys
>WENV170707209
LNAP01015124
276125
Alphaproteobacteria
TAC
Val
>WENV170707470
LNAP01021965
276125
Alphaproteobacteria
TAC
Val
>WENV170706621
LNAP01004810
659897
Alphaproteobacteria
GAC
Val
>WENV170707105
LNAP01012768
659897
Alphaproteobacteria
GAC
Val
>WENV170707607
LNAP01027167
659897
Alphaproteobacteria
GAC
Val
>WENV170706698
LNAP01005681
454623
Alphaproteobacteria
TAC
Val
>WENV170707809
LNAP01034836
180414
Alphaproteobacteria
CAG
Leu
>WENV170707517
LNAP01023612
465568
Alphaproteobacteria
GGC
Ala
>WENV170706929
LNAP01009106
113271
Alphaproteobacteria
CAG
Leu
>WENV170706955
LNAP01009708
113271
Alphaproteobacteria
CAG
Leu
>WENV170707407
LNAP01019740
113271
Alphaproteobacteria
CAG
Leu
>WENV170707893
LNAP01038097
113271
Alphaproteobacteria
CAG
Leu
>WENV170705920
LNAP01000619
273424
Alphaproteobacteria
TAC
Val
>WENV170706188
LNAP01001589
457407
Alphaproteobacteria
TTT
Lys
>WENV170707312
LNAP01017079
457407
Alphaproteobacteria
TTT
Lys
>WENV170706967
LNAP01010005
452339
Alphaproteobacteria
TGC
Ala
>WENV170706709
LNAP01005855
787495
Alphaproteobacteria
TCC
Gly
>WENV170708280
LNAP01065155
275909
Alphaproteobacteria
CCA
Trp
>WENV170706132
LNAP01001273
72978
Alphaproteobacteria
TAA
Leu
>WENV170705623
LNAP01000026
293762
Alphaproteobacteria
GGG
Pro
>WENV170706400
LNAP01002842
273428
Alphaproteobacteria
TCG
Arg
>WENV170706531
LNAP01003976
273428
Alphaproteobacteria
TCG
Arg
>WENV170706851
LNAP01007542
273428
Alphaproteobacteria
TCG
Arg
>WENV170705930
LNAP01000669
270775
Alphaproteobacteria
ACG
Arg
>WENV170706198
LNAP01001645
270775
Alphaproteobacteria
ACG
Arg
>WENV170707454
LNAP01021309
270775
Alphaproteobacteria
ACG
Arg
>WENV170708570
LNAP01097624
270775
Alphaproteobacteria
ACG
Arg
>WENV170708682
LNAP01101822
270775
Alphaproteobacteria
ACG
Arg
>WENV170706131
LNAP01001271
658305
Alphaproteobacteria
GAC
Val
>WENV170706520
LNAP01003850
658305
Alphaproteobacteria
GAC
Val
>WENV170705756
LNAP01000203
654946
Alphaproteobacteria
TTG
Gln
>WENV170706148
LNAP01001376
654946
Alphaproteobacteria
TTG
Gln
>WENV170706812
LNAP01007103
180390
Alphaproteobacteria
CAA
Leu
>WENV170707098
LNAP01012683
180390
Alphaproteobacteria
CAA
Leu
>WENV170705632
LNAP01000036
45978
Alphaproteobacteria
TGA
Ser
>WENV170706023
LNAP01000868
277455
Alphaproteobacteria
CAT
Met
>WENV170706473
LNAP01003364
661074
Alphaproteobacteria
GCC
Gly
>WENV170707466
LNAP01021853
281547
Alphaproteobacteria
CAT
Met
>WENV170705849
LNAP01000483
654523
Alphaproteobacteria
GTT
Asn
>WENV170706133
LNAP01001275
654952
Alphaproteobacteria
GCC
Gly
>WENV170706221
LNAP01001732
654952
Alphaproteobacteria
GCC
Gly
>WENV170706764
LNAP01006325
654952
Alphaproteobacteria
GCC
Gly
>WENV170706686
LNAP01005578
154314
Alphaproteobacteria
GTA
Tyr
>WENV170707907
LNAP01039052
464087
Alphaproteobacteria
TTC
Glu
>WENV170705611
LNAP01000019
46323
Alphaproteobacteria
TGA
Ser
>WENV170706800
LNAP01006865
46323
Alphaproteobacteria
TGA
Ser
>WENV170705900
LNAP01000598
654681
Alphaproteobacteria
GCC
Gly
>WENV170707455
LNAP01021312
654681
Alphaproteobacteria
GCC
Gly
>WENV170708429
LNAP01080505
654681
Alphaproteobacteria
GCC
Gly
>WENV170706314
LNAP01001998
781246
Alphaproteobacteria
GCA
Cys
>WENV170706905
LNAP01008749
781246
Alphaproteobacteria
GCA
Cys
>WENV170707675
LNAP01029168
660487
Alphaproteobacteria
GCC
Gly
>WENV170706570
LNAP01004313
654944
Alphaproteobacteria
TGT
Thr
>WENV170706110
LNAP01001170
454489
Alphaproteobacteria
CGC
Ala
>WENV170706113
LNAP01001183
454489
Alphaproteobacteria
CGC
Ala
>WENV170706483
LNAP01003451
454489
Alphaproteobacteria
CGC
Ala
>WENV170706886
LNAP01008309
454489
Alphaproteobacteria
CGC
Ala
>WENV170706639
LNAP01005019
73056
Alphaproteobacteria
TAA
Leu
>WENV170705757
LNAP01000207
46439
Alphaproteobacteria
CGA
Ser
>WENV170706099
LNAP01001095
45977
Alphaproteobacteria
CGA
Ser
>WENV170706279
LNAP01001832
45977
Alphaproteobacteria
CGA
Ser
>WENV170707006
LNAP01010782
276127
Alphaproteobacteria
TCT
Arg
>WENV170707533
LNAP01024162
276127
Alphaproteobacteria
TCT
Arg
>WENV170708070
LNAP01047791
276127
Alphaproteobacteria
TCT
Arg
>WENV170708204
LNAP01058463
276127
Alphaproteobacteria
TCT
Arg
>WENV170708419
LNAP01079717
454318
Alphaproteobacteria
GGC
Ala
>WENV170705609
LNAP01000015
273427
Alphaproteobacteria
CCT
Arg
>WENV170706114
LNAP01001183
458930
Alphaproteobacteria
CGT
Thr
>WENV170707764
LNAP01032958
458930
Alphaproteobacteria
CGT
Thr
>WENV170707254
LNAP01016186
656333
Alphaproteobacteria
CAC
Val
>WENV170707564
LNAP01025511
656333
Alphaproteobacteria
CAC
Val
>WENV170708042
LNAP01046028
656333
Alphaproteobacteria
CAC
Val
>WENV170706139
LNAP01001317
181193
Alphaproteobacteria
GAG
Leu
>WENV170706730
LNAP01005918
181193
Alphaproteobacteria
GAG
Leu
>WENV170707179
LNAP01014498
181193
Alphaproteobacteria
GAG
Leu
>WENV170707636
LNAP01028063
181193
Alphaproteobacteria
GAG
Leu
>WENV170705657
LNAP01000075
182437
Alphaproteobacteria
CAA
Leu
>WENV170706675
LNAP01005424
182437
Alphaproteobacteria
CAA
Leu
>WENV170707665
LNAP01028897
454588
Alphaproteobacteria
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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