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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
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|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
213 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170709628
LNFM01000541
297043
Betaproteobacteria
CAT
Met
>WENV170712270
LNFM01011666
297043
Betaproteobacteria
CAT
Met
>WENV170710311
LNFM01001511
480504
Betaproteobacteria
TTT
Lys
>WENV170712458
LNFM01013563
302359
Betaproteobacteria
CAT
Met
>WENV170713918
LNFM01046689
302359
Betaproteobacteria
CAT
Met
>WENV170712208
LNFM01010862
452701
Betaproteobacteria
CCA
Trp
>WENV170709787
LNFM01000706
780573
Betaproteobacteria
TCC
Gly
>WENV170712466
LNFM01013699
780573
Betaproteobacteria
TCC
Gly
>WENV170714709
LNFM01095161
780573
Betaproteobacteria
TCC
Gly
>WENV170709374
LNFM01000294
112334
Betaproteobacteria
CAG
Leu
>WENV170708927
LNFM01000032
271893
Betaproteobacteria
GGG
Pro
>WENV170714780
LNFM01101145
452596
Betaproteobacteria
GTT
Asn
>WENV170710484
LNFM01001874
288756
Betaproteobacteria
CAT
Met
>WENV170710008
LNFM01001042
273217
Betaproteobacteria
ACG
Arg
>WENV170712116
LNFM01009848
273217
Betaproteobacteria
ACG
Arg
>WENV170713008
LNFM01022256
273217
Betaproteobacteria
ACG
Arg
>WENV170709485
LNFM01000387
455327
Betaproteobacteria
GCC
Gly
>WENV170713726
LNFM01040121
455327
Betaproteobacteria
GCC
Gly
>WENV170711676
LNFM01006449
454453
Betaproteobacteria
GCC
Gly
>WENV170711678
LNFM01006449
454453
Betaproteobacteria
GCC
Gly
>WENV170712064
LNFM01009537
454453
Betaproteobacteria
GCC
Gly
>WENV170710393
LNFM01001674
154091
Betaproteobacteria
GTA
Tyr
>WENV170713953
LNFM01048148
154091
Betaproteobacteria
GTA
Tyr
>WENV170714588
LNFM01084147
154091
Betaproteobacteria
GTA
Tyr
>WENV170714658
LNFM01092030
154091
Betaproteobacteria
GTA
Tyr
>WENV170714747
LNFM01097603
154091
Betaproteobacteria
GTA
Tyr
>WENV170711386
LNFM01004993
286012
Betaproteobacteria
CAT
Met
>WENV170708958
LNFM01000048
274063
Betaproteobacteria
ACG
Arg
>WENV170709095
LNFM01000104
655629
Betaproteobacteria
CAC
Val
>WENV170713697
LNFM01039168
655629
Betaproteobacteria
CAC
Val
>WENV170714010
LNFM01050672
655629
Betaproteobacteria
CAC
Val
>WENV170714327
LNFM01068000
655629
Betaproteobacteria
CAC
Val
>WENV170710873
LNFM01002889
463660
Betaproteobacteria
CCA
Trp
>WENV170713492
LNFM01032860
463660
Betaproteobacteria
CCA
Trp
>WENV170713924
LNFM01046817
463660
Betaproteobacteria
CCA
Trp
>WENV170711066
LNFM01003428
273289
Betaproteobacteria
CAT
Met
>WENV170712500
LNFM01014122
273289
Betaproteobacteria
CAT
Met
>WENV170710486
LNFM01001874
273391
Betaproteobacteria
TTG
Gln
>WENV170710640
LNFM01002278
454456
Betaproteobacteria
CTT
Lys
>WENV170713076
LNFM01023423
454456
Betaproteobacteria
CTT
Lys
>WENV170714795
LNFM01102693
455720
Betaproteobacteria
TGC
Ala
>WENV170711677
LNFM01006449
780579
Betaproteobacteria
GCA
Cys
>WENV170708902
LNFM01000021
452923
Betaproteobacteria
TTT
Lys
>WENV170711134
LNFM01003707
274718
Betaproteobacteria
GGG
Pro
>WENV170712870
LNFM01019203
271693
Betaproteobacteria
TCT
Arg
>WENV170710086
LNFM01001133
457359
Betaproteobacteria
TTT
Lys
>WENV170712978
LNFM01021661
457359
Betaproteobacteria
TTT
Lys
>WENV170714336
LNFM01068352
457359
Betaproteobacteria
TTT
Lys
>WENV170714457
LNFM01074828
457359
Betaproteobacteria
TTT
Lys
>WENV170714922
LNFM01115485
465524
Betaproteobacteria
TGC
Ala
>WENV170710381
LNFM01001660
112692
Betaproteobacteria
TAG
Leu
>WENV170710886
LNFM01002925
112692
Betaproteobacteria
TAG
Leu
>WENV170711845
LNFM01007815
112692
Betaproteobacteria
TAG
Leu
>WENV170713458
LNFM01032002
112692
Betaproteobacteria
TAG
Leu
>WENV170714846
LNFM01106663
487364
Betaproteobacteria
TTC
Glu
>WENV170713922
LNFM01046769
487364
Betaproteobacteria
TTC
Glu
>WENV170713913
LNFM01046494
487364
Betaproteobacteria
TTC
Glu
>WENV170712107
LNFM01009786
487364
Betaproteobacteria
TTC
Glu
>WENV170711745
LNFM01007006
487364
Betaproteobacteria
TTC
Glu
>WENV170710461
LNFM01001809
487364
Betaproteobacteria
TTC
Glu
>WENV170713917
LNFM01046675
663644
Betaproteobacteria
CAC
Val
>WENV170713443
LNFM01031572
663644
Betaproteobacteria
CAC
Val
>WENV170713362
LNFM01029438
663644
Betaproteobacteria
CAC
Val
>WENV170713303
LNFM01028435
663644
Betaproteobacteria
CAC
Val
>WENV170713055
LNFM01023068
663644
Betaproteobacteria
CAC
Val
>WENV170712859
LNFM01018979
663644
Betaproteobacteria
CAC
Val
>WENV170712646
LNFM01015917
663644
Betaproteobacteria
CAC
Val
>WENV170711083
LNFM01003477
663644
Betaproteobacteria
CAC
Val
>WENV170714463
LNFM01075057
271596
Betaproteobacteria
GAT
Ile
>WENV170709630
LNFM01000541
282077
Betaproteobacteria
TTG
Gln
>WENV170713674
LNFM01038271
282077
Betaproteobacteria
TTG
Gln
>WENV170715087
LNFM01131985
465310
Betaproteobacteria
TGC
Ala
>WENV170708874
LNFM01000012
655859
Betaproteobacteria
GGT
Thr
>WENV170709822
LNFM01000771
454563
Betaproteobacteria
TAC
Val
>WENV170712339
LNFM01012230
454563
Betaproteobacteria
TAC
Val
>WENV170709205
LNFM01000180
179980
Betaproteobacteria
GTA
Tyr
>WENV170713022
LNFM01022509
454227
Betaproteobacteria
GTG
His
>WENV170712679
LNFM01016302
454227
Betaproteobacteria
GTG
His
>WENV170712572
LNFM01015108
454227
Betaproteobacteria
GTG
His
>WENV170710428
LNFM01001730
454227
Betaproteobacteria
GTG
His
>WENV170710729
LNFM01002496
454227
Betaproteobacteria
GTG
His
>WENV170710965
LNFM01003131
454227
Betaproteobacteria
GTG
His
>WENV170712284
LNFM01011776
454227
Betaproteobacteria
GTG
His
>WENV170708892
LNFM01000019
180358
Betaproteobacteria
CAG
Leu
>WENV170714464
LNFM01075057
452924
Betaproteobacteria
TGC
Ala
>WENV170710466
LNFM01001822
273219
Betaproteobacteria
TCT
Arg
>WENV170709201
LNFM01000179
180620
Betaproteobacteria
GAG
Leu
>WENV170709312
LNFM01000254
780080
Betaproteobacteria
GCA
Cys
>WENV170709748
LNFM01000662
180380
Betaproteobacteria
CAG
Leu
>WENV170709749
LNFM01000662
180380
Betaproteobacteria
CAG
Leu
>WENV170714476
LNFM01075925
180380
Betaproteobacteria
CAG
Leu
>WENV170709420
LNFM01000328
46122
Betaproteobacteria
CGA
Ser
>WENV170711130
LNFM01003699
46122
Betaproteobacteria
CGA
Ser
>WENV170711867
LNFM01007955
46122
Betaproteobacteria
CGA
Ser
>WENV170713781
LNFM01041811
46122
Betaproteobacteria
CGA
Ser
>WENV170709211
LNFM01000185
455252
Betaproteobacteria
GTG
His
>WENV170714361
LNFM01069655
788678
Betaproteobacteria
TCC
Gly
>WENV170708870
LNFM01000011
454348
Betaproteobacteria
GAA
Phe
>WENV170713975
LNFM01049000
452711
Betaproteobacteria
TTT
Lys
>WENV170712280
LNFM01011755
274641
Betaproteobacteria
TTG
Gln
>WENV170713230
LNFM01026737
458932
Betaproteobacteria
GTT
Asn
>WENV170714285
LNFM01065260
458932
Betaproteobacteria
GTT
Asn
>WENV170714040
LNFM01051757
303778
Betaproteobacteria
GAT
Ile
>WENV170712449
LNFM01013453
180123
Betaproteobacteria
CAG
Leu
>WENV170713540
LNFM01034173
180123
Betaproteobacteria
CAG
Leu
>WENV170714804
LNFM01103425
180123
Betaproteobacteria
CAG
Leu
>WENV170709375
LNFM01000294
455929
Betaproteobacteria
GCC
Gly
>WENV170709377
LNFM01000294
455929
Betaproteobacteria
GCC
Gly
>WENV170709357
LNFM01000283
454252
Betaproteobacteria
CGC
Ala
>WENV170709505
LNFM01000403
454252
Betaproteobacteria
CGC
Ala
>WENV170710205
LNFM01001294
454252
Betaproteobacteria
CGC
Ala
>WENV170713431
LNFM01031097
454252
Betaproteobacteria
CGC
Ala
>WENV170714094
LNFM01053880
454252
Betaproteobacteria
CGC
Ala
>WENV170708923
LNFM01000029
456521
Betaproteobacteria
TGT
Thr
>WENV170712199
LNFM01010768
456398
Betaproteobacteria
GAA
Phe
>WENV170710791
LNFM01002640
456398
Betaproteobacteria
GAA
Phe
>WENV170714803
LNFM01103393
780146
Betaproteobacteria
CCC
Gly
>WENV170714681
LNFM01093444
780146
Betaproteobacteria
CCC
Gly
>WENV170714627
LNFM01088515
780146
Betaproteobacteria
CCC
Gly
>WENV170714532
LNFM01079853
780146
Betaproteobacteria
CCC
Gly
>WENV170709610
LNFM01000529
780146
Betaproteobacteria
CCC
Gly
>WENV170710587
LNFM01002092
780146
Betaproteobacteria
CCC
Gly
>WENV170711177
LNFM01003887
780146
Betaproteobacteria
CCC
Gly
>WENV170713367
LNFM01029599
780146
Betaproteobacteria
CCC
Gly
>WENV170714126
LNFM01055891
780146
Betaproteobacteria
CCC
Gly
>WENV170714430
LNFM01073099
780146
Betaproteobacteria
CCC
Gly
>WENV170709475
LNFM01000373
780070
Betaproteobacteria
GCA
Cys
>WENV170710930
LNFM01003027
780070
Betaproteobacteria
GCA
Cys
>WENV170711274
LNFM01004302
780070
Betaproteobacteria
GCA
Cys
>WENV170713929
LNFM01047033
780070
Betaproteobacteria
GCA
Cys
>WENV170714599
LNFM01085241
297661
Betaproteobacteria
GAT
Ile
>WENV170709196
LNFM01000176
457105
Betaproteobacteria
TAC
Val
>WENV170709453
LNFM01000368
457105
Betaproteobacteria
TAC
Val
>WENV170709959
LNFM01000985
457105
Betaproteobacteria
TAC
Val
>WENV170712087
LNFM01009725
282032
Betaproteobacteria
GGG
Pro
>WENV170711753
LNFM01007081
282032
Betaproteobacteria
GGG
Pro
>WENV170710885
LNFM01002925
282032
Betaproteobacteria
GGG
Pro
>WENV170713856
LNFM01044626
303770
Betaproteobacteria
ACG
Arg
>WENV170713302
LNFM01028388
452706
Betaproteobacteria
CAT
Met
>WENV170709353
LNFM01000280
452706
Betaproteobacteria
CAT
Met
>WENV170710521
LNFM01001953
452706
Betaproteobacteria
CAT
Met
>WENV170708873
LNFM01000012
780079
Betaproteobacteria
TCC
Gly
>WENV170714772
LNFM01100291
275880
Betaproteobacteria
GAT
Ile
>WENV170711186
LNFM01003925
464315
Betaproteobacteria
GTT
Asn
>WENV170711833
LNFM01007694
464315
Betaproteobacteria
GTT
Asn
>WENV170712647
LNFM01015942
464315
Betaproteobacteria
GTT
Asn
>WENV170713512
LNFM01033503
464315
Betaproteobacteria
GTT
Asn
>WENV170713692
LNFM01038965
464315
Betaproteobacteria
GTT
Asn
>WENV170712629
LNFM01015687
45973
Betaproteobacteria
CGA
Ser
>WENV170714624
LNFM01088297
45973
Betaproteobacteria
CGA
Ser
>WENV170709558
LNFM01000469
780738
Betaproteobacteria
GCA
Cys
>WENV170709855
LNFM01000809
780738
Betaproteobacteria
GCA
Cys
>WENV170712528
LNFM01014456
780738
Betaproteobacteria
GCA
Cys
>WENV170713514
LNFM01033523
780738
Betaproteobacteria
GCA
Cys
>WENV170713567
LNFM01034863
780738
Betaproteobacteria
GCA
Cys
>WENV170713057
LNFM01023121
487621
Betaproteobacteria
GCC
Gly
>WENV170713775
LNFM01041630
487621
Betaproteobacteria
GCC
Gly
>WENV170708871
LNFM01000012
454349
Betaproteobacteria
CCG
Arg
>WENV170709277
LNFM01000237
465080
Betaproteobacteria
GGC
Ala
>WENV170709587
LNFM01000497
655036
Betaproteobacteria
CCT
Arg
>WENV170713469
LNFM01032419
456523
Betaproteobacteria
TTC
Glu
>WENV170712559
LNFM01014879
487572
Betaproteobacteria
CCG
Arg
>WENV170713128
LNFM01024389
487572
Betaproteobacteria
CCG
Arg
>WENV170713273
LNFM01027736
487572
Betaproteobacteria
CCG
Arg
>WENV170714375
LNFM01070158
487572
Betaproteobacteria
CCG
Arg
>WENV170711909
LNFM01008264
273481
Betaproteobacteria
GGG
Pro
>WENV170714050
LNFM01052086
273481
Betaproteobacteria
GGG
Pro
>WENV170714949
LNFM01118579
273481
Betaproteobacteria
GGG
Pro
>WENV170712113
LNFM01009842
455351
Betaproteobacteria
TAC
Val
>WENV170714205
LNFM01060518
283585
Betaproteobacteria
CAT
Met
>WENV170714535
LNFM01079922
452713
Betaproteobacteria
GAA
Phe
>WENV170709963
LNFM01000992
452713
Betaproteobacteria
GAA
Phe
>WENV170712421
LNFM01013191
452713
Betaproteobacteria
GAA
Phe
>WENV170712970
LNFM01021506
452713
Betaproteobacteria
GAA
Phe
>WENV170713227
LNFM01026718
452713
Betaproteobacteria
GAA
Phe
>WENV170711488
LNFM01005498
276755
Betaproteobacteria
TCT
Arg
>WENV170711538
LNFM01005756
89670
Betaproteobacteria
TGA
Ser
>WENV170714594
LNFM01084604
282068
Betaproteobacteria
TTG
Gln
>WENV170712179
LNFM01010438
274850
Betaproteobacteria
CGG
Pro
>WENV170713510
LNFM01033455
274850
Betaproteobacteria
CGG
Pro
>WENV170709552
LNFM01000455
283584
Betaproteobacteria
CAT
Met
>WENV170709898
LNFM01000870
283584
Betaproteobacteria
CAT
Met
>WENV170711334
LNFM01004637
283584
Betaproteobacteria
CAT
Met
>WENV170711994
LNFM01008990
283584
Betaproteobacteria
CAT
Met
>WENV170712221
LNFM01011016
283584
Betaproteobacteria
CAT
Met
>WENV170712239
LNFM01011191
283584
Betaproteobacteria
CAT
Met
>WENV170712829
LNFM01018528
283584
Betaproteobacteria
CAT
Met
>WENV170713558
LNFM01034671
283584
Betaproteobacteria
CAT
Met
>WENV170713565
LNFM01034842
283584
Betaproteobacteria
CAT
Met
>WENV170714971
LNFM01120332
283584
Betaproteobacteria
CAT
Met
>WENV170710383
LNFM01001660
782432
Betaproteobacteria
GCA
Cys
>WENV170710491
LNFM01001885
782432
Betaproteobacteria
GCA
Cys
>WENV170712473
LNFM01013756
782432
Betaproteobacteria
GCA
Cys
>WENV170714808
LNFM01103785
782432
Betaproteobacteria
GCA
Cys
>WENV170710804
LNFM01002690
454455
Betaproteobacteria
CCG
Arg
>WENV170711263
LNFM01004264
454455
Betaproteobacteria
CCG
Arg
>WENV170711443
LNFM01005251
454455
Betaproteobacteria
CCG
Arg
>WENV170711642
LNFM01006254
454455
Betaproteobacteria
CCG
Arg
>WENV170712206
LNFM01010838
454455
Betaproteobacteria
CCG
Arg
>WENV170712329
LNFM01012191
454455
Betaproteobacteria
CCG
Arg
>WENV170713124
LNFM01024297
454455
Betaproteobacteria
CCG
Arg
>WENV170713168
LNFM01025407
454455
Betaproteobacteria
CCG
Arg
>WENV170713636
LNFM01036933
454455
Betaproteobacteria
CCG
Arg
>WENV170712347
LNFM01012250
456400
Betaproteobacteria
TTC
Glu
>WENV170714886
LNFM01111745
275526
Betaproteobacteria
TGG
Pro
>WENV170714981
LNFM01121369
273483
Betaproteobacteria
ACG
Arg
>WENV170711908
LNFM01008253
273483
Betaproteobacteria
ACG
Arg
>WENV170711979
LNFM01008835
273483
Betaproteobacteria
ACG
Arg
>WENV170711995
LNFM01008990
273483
Betaproteobacteria
ACG
Arg
>WENV170712222
LNFM01011016
273483
Betaproteobacteria
ACG
Arg
>WENV170714972
LNFM01120332
273483
Betaproteobacteria
ACG
Arg
>WENV170708901
LNFM01000021
653938
Betaproteobacteria
CAC
Val
>WENV170713058
LNFM01023121
780144
Betaproteobacteria
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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