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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170720717
LSQX01163547
72985
Actinobacteria
GAG
Leu
>WENV170726869
LSQX01396775
72985
Actinobacteria
GAG
Leu
>WENV170717835
LSQX01051485
281017
Actinobacteria
GGG
Pro
>WENV170719412
LSQX01113538
281017
Actinobacteria
GGG
Pro
>WENV170724925
LSQX01323960
455044
Actinobacteria
GGT
Thr
>WENV170722090
LSQX01215834
457532
Actinobacteria
CGC
Ala
>WENV170724557
LSQX01309576
780841
Actinobacteria
CCC
Gly
>WENV170722478
LSQX01230822
506607
Actinobacteria
CTT
Lys
>WENV170718740
LSQX01089402
74159
Actinobacteria
GGA
Ser
>WENV170726701
LSQX01390615
74159
Actinobacteria
GGA
Ser
>WENV170726740
LSQX01392554
457511
Actinobacteria
CTC
Glu
>WENV170717020
LSQX01020605
271048
Actinobacteria
CGG
Pro
>WENV170719871
LSQX01131968
660442
Actinobacteria
CAC
Val
>WENV170724693
LSQX01315195
660442
Actinobacteria
CAC
Val
>WENV170717991
LSQX01057578
36899
Actinobacteria
CGA
Ser
>WENV170719027
LSQX01099568
36899
Actinobacteria
CGA
Ser
>WENV170725908
LSQX01360434
452358
Actinobacteria
CCG
Arg
>WENV170717102
LSQX01024543
656379
Actinobacteria
CAC
Val
>WENV170726703
LSQX01390759
276738
Actinobacteria
GGG
Pro
>WENV170717937
LSQX01055213
659861
Actinobacteria
CTG
Gln
>WENV170722477
LSQX01230822
511537
Actinobacteria
GTG
His
>WENV170717275
LSQX01029919
779543
Actinobacteria
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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