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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
9 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170718748
LSQX01089600
455588
Bacteroidetes
GAA
Phe
>WENV170723234
LSQX01260453
112241
Bacteroidetes
CAA
Leu
>WENV170724760
LSQX01317982
660213
Bacteroidetes
TTC
Glu
>WENV170720373
LSQX01150974
87190
Bacteroidetes
TGA
Ser
>WENV170722009
LSQX01212827
180131
Bacteroidetes
TAG
Leu
>WENV170718989
LSQX01097869
279189
Bacteroidetes
GTT
Asn
>WENV170726638
LSQX01388355
279189
Bacteroidetes
GTT
Asn
>WENV170721350
LSQX01186998
275945
Bacteroidetes
GTT
Asn
>WENV170722728
LSQX01241045
570778
Bacteroidetes
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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