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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
51 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170729364
LULF01028796
655167
Alphaproteobacteria
TTC
Glu
>WENV170729360
LULF01028212
273805
Alphaproteobacteria
ACG
Arg
>WENV170729273
LULF01020571
452884
Alphaproteobacteria
CCA
Trp
>WENV170728976
LULF01003832
655225
Alphaproteobacteria
TTG
Gln
>WENV170728794
LULF01000761
455173
Alphaproteobacteria
GAA
Phe
>WENV170729260
LULF01019314
653534
Alphaproteobacteria
GCC
Gly
>WENV170729055
LULF01006348
180542
Alphaproteobacteria
TAG
Leu
>WENV170729248
LULF01017589
46190
Alphaproteobacteria
GGA
Ser
>WENV170728724
LULF01000313
30553
Alphaproteobacteria
GGA
Ser
>WENV170728816
LULF01001073
780260
Alphaproteobacteria
GCA
Cys
>WENV170729052
LULF01006206
655301
Alphaproteobacteria
GGT
Thr
>WENV170729280
LULF01021119
218119
Alphaproteobacteria
>WENV170728790
LULF01000749
45981
Alphaproteobacteria
TGA
Ser
>WENV170728687
LULF01000154
277664
Alphaproteobacteria
GTC
Asp
>WENV170728654
LULF01000055
274224
Alphaproteobacteria
CAT
Met
>WENV170729321
LULF01024487
274224
Alphaproteobacteria
CAT
Met
>WENV170729532
LULF01047050
655359
Alphaproteobacteria
GAC
Val
>WENV170729342
LULF01025806
456891
Alphaproteobacteria
CGT
Thr
>WENV170729483
LULF01040821
653532
Alphaproteobacteria
GTT
Asn
>WENV170728667
LULF01000106
655363
Alphaproteobacteria
GGT
Thr
>WENV170728815
LULF01001062
459032
Alphaproteobacteria
CCA
Trp
>WENV170728907
LULF01002419
780299
Alphaproteobacteria
TCC
Gly
>WENV170728778
LULF01000630
274039
Alphaproteobacteria
CAT
Met
>WENV170728823
LULF01001179
455172
Alphaproteobacteria
GGC
Ala
>WENV170729201
LULF01013974
455172
Alphaproteobacteria
GGC
Ala
>WENV170729500
LULF01043828
655566
Alphaproteobacteria
GAC
Val
>WENV170729430
LULF01035055
273801
Alphaproteobacteria
GTG
His
>WENV170728838
LULF01001318
655300
Alphaproteobacteria
GTT
Asn
>WENV170729345
LULF01026035
275155
Alphaproteobacteria
GGG
Pro
>WENV170729466
LULF01038591
46072
Alphaproteobacteria
GCT
Ser
>WENV170729186
LULF01013276
655166
Alphaproteobacteria
CAC
Val
>WENV170728653
LULF01000052
454512
Alphaproteobacteria
CCA
Trp
>WENV170728751
LULF01000412
455360
Alphaproteobacteria
CGC
Ala
>WENV170728960
LULF01003532
275157
Alphaproteobacteria
TGG
Pro
>WENV170728696
LULF01000191
655361
Alphaproteobacteria
GCC
Gly
>WENV170728935
LULF01003070
454504
Alphaproteobacteria
CAT
Met
>WENV170728968
LULF01003623
455171
Alphaproteobacteria
CGT
Thr
>WENV170729178
LULF01012660
671670
Alphaproteobacteria
CAC
Val
>WENV170729289
LULF01021749
112802
Alphaproteobacteria
GAG
Leu
>WENV170729181
LULF01013009
273907
Alphaproteobacteria
ACG
Arg
>WENV170728674
LULF01000123
281027
Alphaproteobacteria
CCT
Arg
>WENV170728945
LULF01003262
780298
Alphaproteobacteria
CTG
Gln
>WENV170728914
LULF01002561
454914
Alphaproteobacteria
TTT
Lys
>WENV170728713
LULF01000250
112839
Alphaproteobacteria
CAG
Leu
>WENV170729125
LULF01009570
112839
Alphaproteobacteria
CAG
Leu
>WENV170729046
LULF01006058
46034
Alphaproteobacteria
CGA
Ser
>WENV170728818
LULF01001090
180543
Alphaproteobacteria
CAA
Leu
>WENV170729413
LULF01032987
654103
Alphaproteobacteria
GAA
Phe
>WENV170729469
LULF01038905
654103
Alphaproteobacteria
GAA
Phe
>WENV170728731
LULF01000324
780039
Alphaproteobacteria
GCA
Cys
>WENV170729083
LULF01007426
46268
Alphaproteobacteria
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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