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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170736517
LULM01006111
655365
Alphaproteobacteria
TTC
Glu
>WENV170736832
LULM01038840
273797
Alphaproteobacteria
GGG
Pro
>WENV170736305
LULM01000895
455173
Alphaproteobacteria
GAA
Phe
>WENV170736436
LULM01003320
180542
Alphaproteobacteria
TAG
Leu
>WENV170736441
LULM01003475
30553
Alphaproteobacteria
GGA
Ser
>WENV170736388
LULM01002169
780260
Alphaproteobacteria
GCA
Cys
>WENV170736716
LULM01021427
454510
Alphaproteobacteria
CGT
Thr
>WENV170736290
LULM01000741
655301
Alphaproteobacteria
GGT
Thr
>WENV170736745
LULM01025323
46035
Alphaproteobacteria
GGA
Ser
>WENV170736457
LULM01004067
468172
Alphaproteobacteria
TGC
Ala
>WENV170736677
LULM01016895
19999
Alphaproteobacteria
GCT
Ser
>WENV170736852
LULM01042144
655363
Alphaproteobacteria
GGT
Thr
>WENV170736556
LULM01008041
274144
Alphaproteobacteria
GTG
His
>WENV170736251
LULM01000458
459032
Alphaproteobacteria
CCA
Trp
>WENV170736419
LULM01002845
780299
Alphaproteobacteria
TCC
Gly
>WENV170736368
LULM01001723
274039
Alphaproteobacteria
CAT
Met
>WENV170736823
LULM01037598
276089
Alphaproteobacteria
CCG
Arg
>WENV170736678
LULM01016945
273450
Alphaproteobacteria
TCT
Arg
>WENV170736679
LULM01016959
274138
Alphaproteobacteria
CAT
Met
>WENV170736422
LULM01002890
655300
Alphaproteobacteria
GTT
Asn
>WENV170736800
LULM01034061
454512
Alphaproteobacteria
CCA
Trp
>WENV170736805
LULM01035153
113228
Alphaproteobacteria
CAG
Leu
>WENV170736521
LULM01006226
274141
Alphaproteobacteria
CCT
Arg
>WENV170736325
LULM01001063
455171
Alphaproteobacteria
CGT
Thr
>WENV170736435
LULM01003290
273907
Alphaproteobacteria
ACG
Arg
>WENV170736429
LULM01003019
780298
Alphaproteobacteria
CTG
Gln
>WENV170736418
LULM01002839
112839
Alphaproteobacteria
CAG
Leu
>WENV170736287
LULM01000692
180543
Alphaproteobacteria
CAA
Leu
>WENV170736715
LULM01021427
780039
Alphaproteobacteria
GCA
Cys
>WENV170736522
LULM01006248
180561
Alphaproteobacteria
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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