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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170737476
LULO01000221
655225
Alphaproteobacteria
TTG
Gln
>WENV170737488
LULO01000266
455173
Alphaproteobacteria
GAA
Phe
>WENV170737576
LULO01000783
180542
Alphaproteobacteria
TAG
Leu
>WENV170737950
LULO01008645
46190
Alphaproteobacteria
GGA
Ser
>WENV170737380
LULO01000004
30553
Alphaproteobacteria
GGA
Ser
>WENV170737478
LULO01000225
780260
Alphaproteobacteria
GCA
Cys
>WENV170737526
LULO01000474
655301
Alphaproteobacteria
GGT
Thr
>WENV170737879
LULO01006372
218119
Alphaproteobacteria
>WENV170737682
LULO01001576
45981
Alphaproteobacteria
TGA
Ser
>WENV170737394
LULO01000017
277664
Alphaproteobacteria
GTC
Asp
>WENV170737471
LULO01000201
274224
Alphaproteobacteria
CAT
Met
>WENV170737439
LULO01000114
655363
Alphaproteobacteria
GGT
Thr
>WENV170737561
LULO01000681
459032
Alphaproteobacteria
CCA
Trp
>WENV170737600
LULO01000905
780299
Alphaproteobacteria
TCC
Gly
>WENV170737501
LULO01000347
274039
Alphaproteobacteria
CAT
Met
>WENV170737385
LULO01000010
455172
Alphaproteobacteria
GGC
Ala
>WENV170737542
LULO01000578
455172
Alphaproteobacteria
GGC
Ala
>WENV170738167
LULO01023189
274131
Alphaproteobacteria
CAT
Met
>WENV170737481
LULO01000243
655300
Alphaproteobacteria
GTT
Asn
>WENV170737413
LULO01000038
455360
Alphaproteobacteria
CGC
Ala
>WENV170737451
LULO01000144
655361
Alphaproteobacteria
GCC
Gly
>WENV170737383
LULO01000010
454504
Alphaproteobacteria
CAT
Met
>WENV170738025
LULO01012176
656140
Alphaproteobacteria
GAC
Val
>WENV170737530
LULO01000481
455171
Alphaproteobacteria
CGT
Thr
>WENV170737547
LULO01000637
273907
Alphaproteobacteria
ACG
Arg
>WENV170738183
LULO01026053
780582
Alphaproteobacteria
TCC
Gly
>WENV170737403
LULO01000032
281027
Alphaproteobacteria
CCT
Arg
>WENV170737610
LULO01000946
780298
Alphaproteobacteria
CTG
Gln
>WENV170738124
LULO01019533
454914
Alphaproteobacteria
TTT
Lys
>WENV170738132
LULO01020215
454914
Alphaproteobacteria
TTT
Lys
>WENV170737437
LULO01000108
112839
Alphaproteobacteria
CAG
Leu
>WENV170737470
LULO01000191
180543
Alphaproteobacteria
CAA
Leu
>WENV170737416
LULO01000056
780039
Alphaproteobacteria
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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