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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170743394
LULW01000001
277664
Alphaproteobacteria
GTC
Asp
>WENV170743392
LULW01000001
274224
Alphaproteobacteria
CAT
Met
>WENV170743375
LULW01000001
455172
Alphaproteobacteria
GGC
Ala
>WENV170743389
LULW01000001
455360
Alphaproteobacteria
CGC
Ala
>WENV170743396
LULW01000001
454504
Alphaproteobacteria
CAT
Met
>WENV170743376
LULW01000001
281027
Alphaproteobacteria
CCT
Arg
>WENV170743404
LULW01000002
30553
Alphaproteobacteria
GGA
Ser
>WENV170743407
LULW01000005
655363
Alphaproteobacteria
GGT
Thr
>WENV170743412
LULW01000007
454512
Alphaproteobacteria
CCA
Trp
>WENV170743410
LULW01000007
655361
Alphaproteobacteria
GCC
Gly
>WENV170743417
LULW01000012
780039
Alphaproteobacteria
GCA
Cys
>WENV170743437
LULW01000046
273907
Alphaproteobacteria
ACG
Arg
>WENV170743447
LULW01000078
459032
Alphaproteobacteria
CCA
Trp
>WENV170743450
LULW01000090
780299
Alphaproteobacteria
TCC
Gly
>WENV170743455
LULW01000104
780298
Alphaproteobacteria
CTG
Gln
>WENV170743457
LULW01000114
455173
Alphaproteobacteria
GAA
Phe
>WENV170743466
LULW01000129
655301
Alphaproteobacteria
GGT
Thr
>WENV170743468
LULW01000132
45981
Alphaproteobacteria
TGA
Ser
>WENV170743470
LULW01000132
455172
Alphaproteobacteria
GGC
Ala
>WENV170743473
LULW01000145
180543
Alphaproteobacteria
CAA
Leu
>WENV170743490
LULW01000222
274039
Alphaproteobacteria
CAT
Met
>WENV170743537
LULW01000371
780260
Alphaproteobacteria
GCA
Cys
>WENV170743581
LULW01000659
455171
Alphaproteobacteria
CGT
Thr
>WENV170743593
LULW01000743
655300
Alphaproteobacteria
GTT
Asn
>WENV170743620
LULW01000977
180542
Alphaproteobacteria
TAG
Leu
>WENV170743909
LULW01008244
304024
Alphaproteobacteria
GAT
Ile
>WENV170744056
LULW01018335
656140
Alphaproteobacteria
GAC
Val
>WENV170744117
LULW01025494
655271
Alphaproteobacteria
GGT
Thr
>WENV170744125
LULW01026406
655167
Alphaproteobacteria
TTC
Glu
>WENV170744129
LULW01026571
218220
Alphaproteobacteria
>WENV170744141
LULW01027645
655359
Alphaproteobacteria
GAC
Val
>WENV170744162
LULW01031101
452894
Alphaproteobacteria
CCA
Trp
>WENV170744183
LULW01034238
671670
Alphaproteobacteria
CAC
Val
>WENV170744190
LULW01035534
655171
Alphaproteobacteria
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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