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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170746445
LULZ01040950
455405
Gammaproteobacteria
GGT
Thr
>WENV170746175
LULZ01012285
276973
Gammaproteobacteria
GAC
Val
>WENV170746305
LULZ01023430
458352
Gammaproteobacteria
TTG
Gln
>WENV170746137
LULZ01010231
179960
Gammaproteobacteria
TAG
Leu
>WENV170746136
LULZ01010231
779459
Gammaproteobacteria
CCA
Trp
>WENV170746138
LULZ01010231
779459
Gammaproteobacteria
CCA
Trp
>WENV170746238
LULZ01016639
779459
Gammaproteobacteria
CCA
Trp
>WENV170746401
LULZ01034671
276972
Gammaproteobacteria
CCA
Trp
>WENV170746304
LULZ01023430
181084
Gammaproteobacteria
TAG
Leu
>WENV170746366
LULZ01030844
181084
Gammaproteobacteria
TAG
Leu
>WENV170746367
LULZ01030844
276975
Gammaproteobacteria
TGG
Pro
>WENV170746154
LULZ01011151
30792
Gammaproteobacteria
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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