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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170748641
LUME01000418
656944
Gammaproteobacteria
CCT
Arg
>WENV170748819
LUME01002457
453181
Gammaproteobacteria
GTG
His
>WENV170748681
LUME01000659
270982
Gammaproteobacteria
GAT
Ile
>WENV170748952
LUME01005331
276974
Gammaproteobacteria
GGG
Pro
>WENV170748837
LUME01002719
458351
Gammaproteobacteria
TTG
Gln
>WENV170748719
LUME01001166
276971
Gammaproteobacteria
ACG
Arg
>WENV170749119
LUME01011556
455405
Gammaproteobacteria
GGT
Thr
>WENV170748818
LUME01002457
276976
Gammaproteobacteria
TCT
Arg
>WENV170748713
LUME01001069
276973
Gammaproteobacteria
GAC
Val
>WENV170748782
LUME01002010
271287
Gammaproteobacteria
CAT
Met
>WENV170748737
LUME01001413
781121
Gammaproteobacteria
GCA
Cys
>WENV170748772
LUME01001792
273754
Gammaproteobacteria
GTT
Asn
>WENV170748977
LUME01006048
276972
Gammaproteobacteria
CCA
Trp
>WENV170748651
LUME01000463
276972
Gammaproteobacteria
CCA
Trp
>WENV170749020
LUME01007546
271286
Gammaproteobacteria
CAT
Met
>WENV170748820
LUME01002457
181084
Gammaproteobacteria
TAG
Leu
>WENV170749021
LUME01007546
181084
Gammaproteobacteria
TAG
Leu
>WENV170748744
LUME01001472
276970
Gammaproteobacteria
CCG
Arg
>WENV170748817
LUME01002457
276975
Gammaproteobacteria
TGG
Pro
>WENV170749393
LUME01036699
276975
Gammaproteobacteria
TGG
Pro
>WENV170749161
LUME01013625
466186
Gammaproteobacteria
TGC
Ala
>WENV170748974
LUME01006022
30792
Gammaproteobacteria
GGA
Ser
>WENV170748718
LUME01001166
20134
Gammaproteobacteria
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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