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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170749649
LUMF01003454
656944
Gammaproteobacteria
CCT
Arg
>WENV170749579
LUMF01001788
270982
Gammaproteobacteria
GAT
Ile
>WENV170749970
LUMF01027224
276974
Gammaproteobacteria
GGG
Pro
>WENV170749735
LUMF01006696
458351
Gammaproteobacteria
TTG
Gln
>WENV170749724
LUMF01006103
276971
Gammaproteobacteria
ACG
Arg
>WENV170749916
LUMF01019205
276976
Gammaproteobacteria
TCT
Arg
>WENV170749912
LUMF01019205
458352
Gammaproteobacteria
TTG
Gln
>WENV170749725
LUMF01006152
276972
Gammaproteobacteria
CCA
Trp
>WENV170749913
LUMF01019205
271286
Gammaproteobacteria
CAT
Met
>WENV170749914
LUMF01019205
181084
Gammaproteobacteria
TAG
Leu
>WENV170749915
LUMF01019205
276975
Gammaproteobacteria
TGG
Pro
>WENV170749894
LUMF01017831
30792
Gammaproteobacteria
GGA
Ser
>WENV170749723
LUMF01006103
20134
Gammaproteobacteria
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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