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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170751186
LUMI01000023
780582
Alphaproteobacteria
TCC
Gly
>WENV170751299
LUMI01000329
656140
Alphaproteobacteria
GAC
Val
>WENV170751357
LUMI01000549
452894
Alphaproteobacteria
CCA
Trp
>WENV170751361
LUMI01000555
780582
Alphaproteobacteria
TCC
Gly
>WENV170751364
LUMI01000565
270798
Alphaproteobacteria
CGG
Pro
>WENV170751549
LUMI01002354
180489
Alphaproteobacteria
TAG
Leu
>WENV170751620
LUMI01003649
270796
Alphaproteobacteria
GTC
Asp
>WENV170751758
LUMI01007895
656140
Alphaproteobacteria
GAC
Val
>WENV170751761
LUMI01007923
275828
Alphaproteobacteria
GTC
Asp
>WENV170751786
LUMI01008742
273603
Alphaproteobacteria
TGG
Pro
>WENV170751884
LUMI01014260
277700
Alphaproteobacteria
GTG
His
>WENV170751890
LUMI01014318
180489
Alphaproteobacteria
TAG
Leu
>WENV170751905
LUMI01015230
46035
Alphaproteobacteria
GGA
Ser
>WENV170751949
LUMI01018511
452884
Alphaproteobacteria
CCA
Trp
>WENV170752028
LUMI01026071
653532
Alphaproteobacteria
GTT
Asn
>WENV170752030
LUMI01026169
452894
Alphaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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