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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170751490
LUMI01001628
276972
Gammaproteobacteria
CCA
Trp
>WENV170751493
LUMI01001635
453181
Gammaproteobacteria
GTG
His
>WENV170751492
LUMI01001635
276976
Gammaproteobacteria
TCT
Arg
>WENV170751495
LUMI01001635
276975
Gammaproteobacteria
TGG
Pro
>WENV170751491
LUMI01001635
276975
Gammaproteobacteria
TGG
Pro
>WENV170751513
LUMI01001919
458352
Gammaproteobacteria
TTG
Gln
>WENV170751516
LUMI01001919
458352
Gammaproteobacteria
TTG
Gln
>WENV170751514
LUMI01001919
271286
Gammaproteobacteria
CAT
Met
>WENV170751515
LUMI01001919
181084
Gammaproteobacteria
TAG
Leu
>WENV170751518
LUMI01001969
273754
Gammaproteobacteria
GTT
Asn
>WENV170751553
LUMI01002412
456510
Gammaproteobacteria
GGC
Ala
>WENV170751555
LUMI01002486
276970
Gammaproteobacteria
CCG
Arg
>WENV170751578
LUMI01002897
656944
Gammaproteobacteria
CCT
Arg
>WENV170751621
LUMI01003670
30792
Gammaproteobacteria
GGA
Ser
>WENV170751783
LUMI01008622
276974
Gammaproteobacteria
GGG
Pro
>WENV170751879
LUMI01013764
455405
Gammaproteobacteria
GGT
Thr
>WENV170751924
LUMI01016721
467367
Gammaproteobacteria
GGT
Thr
>WENV170751971
LUMI01020418
113737
Gammaproteobacteria
CAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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