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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170756250
LUMO01014792
275828
Alphaproteobacteria
GTC
Asp
>WENV170756234
LUMO01013885
180489
Alphaproteobacteria
TAG
Leu
>WENV170756146
LUMO01008103
218220
Alphaproteobacteria
>WENV170756121
LUMO01006981
277700
Alphaproteobacteria
GTG
His
>WENV170756071
LUMO01004174
452894
Alphaproteobacteria
CCA
Trp
>WENV170756247
LUMO01014496
454059
Alphaproteobacteria
TTT
Lys
>WENV170756451
LUMO01037885
273803
Alphaproteobacteria
CCT
Arg
>WENV170756291
LUMO01017699
273603
Alphaproteobacteria
TGG
Pro
>WENV170755888
LUMO01000343
656140
Alphaproteobacteria
GAC
Val
>WENV170755946
LUMO01000862
656140
Alphaproteobacteria
GAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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