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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
53 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170759105
LUMS01002521
273797
Alphaproteobacteria
GGG
Pro
>WENV170759266
LUMS01008998
452917
Alphaproteobacteria
TAC
Val
>WENV170759312
LUMS01011594
273805
Alphaproteobacteria
ACG
Arg
>WENV170759199
LUMS01005885
452884
Alphaproteobacteria
CCA
Trp
>WENV170759187
LUMS01005465
46070
Alphaproteobacteria
CGA
Ser
>WENV170759461
LUMS01024685
270792
Alphaproteobacteria
CAT
Met
>WENV170759260
LUMS01008556
653534
Alphaproteobacteria
GCC
Gly
>WENV170759427
LUMS01021132
653534
Alphaproteobacteria
GCC
Gly
>WENV170759159
LUMS01004764
45799
Alphaproteobacteria
GCT
Ser
>WENV170758814
LUMS01000005
30553
Alphaproteobacteria
GGA
Ser
>WENV170759262
LUMS01008638
291540
Alphaproteobacteria
TGG
Pro
>WENV170759407
LUMS01019360
218119
Alphaproteobacteria
>WENV170759044
LUMS01001435
218119
Alphaproteobacteria
>WENV170759185
LUMS01005462
653538
Alphaproteobacteria
TTC
Glu
>WENV170759364
LUMS01015528
656063
Alphaproteobacteria
GAC
Val
>WENV170758810
LUMS01000004
277664
Alphaproteobacteria
GTC
Asp
>WENV170759094
LUMS01002248
656297
Alphaproteobacteria
TTG
Gln
>WENV170759480
LUMS01029036
275153
Alphaproteobacteria
CGG
Pro
>WENV170759235
LUMS01007261
154065
Alphaproteobacteria
GAG
Leu
>WENV170759386
LUMS01017284
297572
Alphaproteobacteria
GTG
His
>WENV170759106
LUMS01002548
653532
Alphaproteobacteria
GTT
Asn
>WENV170758815
LUMS01000006
655363
Alphaproteobacteria
GGT
Thr
>WENV170759070
LUMS01001892
274039
Alphaproteobacteria
CAT
Met
>WENV170759436
LUMS01022304
455172
Alphaproteobacteria
GGC
Ala
>WENV170758823
LUMS01000012
455172
Alphaproteobacteria
GGC
Ala
>WENV170759344
LUMS01014592
655394
Alphaproteobacteria
GTT
Asn
>WENV170759130
LUMS01003464
274131
Alphaproteobacteria
CAT
Met
>WENV170759355
LUMS01015330
274131
Alphaproteobacteria
CAT
Met
>WENV170759222
LUMS01006602
273801
Alphaproteobacteria
GTG
His
>WENV170759488
LUMS01032331
274223
Alphaproteobacteria
CCG
Arg
>WENV170758983
LUMS01000778
113188
Alphaproteobacteria
GAG
Leu
>WENV170759268
LUMS01009167
655300
Alphaproteobacteria
GTT
Asn
>WENV170758997
LUMS01000898
46072
Alphaproteobacteria
GCT
Ser
>WENV170759102
LUMS01002429
655166
Alphaproteobacteria
CAC
Val
>WENV170758799
LUMS01000003
454512
Alphaproteobacteria
CCA
Trp
>WENV170758795
LUMS01000001
455360
Alphaproteobacteria
CGC
Ala
>WENV170759399
LUMS01018494
455360
Alphaproteobacteria
CGC
Ala
>WENV170759087
LUMS01002190
275157
Alphaproteobacteria
TGG
Pro
>WENV170759183
LUMS01005309
270796
Alphaproteobacteria
GTC
Asp
>WENV170758797
LUMS01000003
655361
Alphaproteobacteria
GCC
Gly
>WENV170759211
LUMS01006107
274133
Alphaproteobacteria
ACG
Arg
>WENV170759154
LUMS01004350
655822
Alphaproteobacteria
GAC
Val
>WENV170758821
LUMS01000012
454504
Alphaproteobacteria
CAT
Met
>WENV170758819
LUMS01000011
281027
Alphaproteobacteria
CCT
Arg
>WENV170759300
LUMS01010585
780298
Alphaproteobacteria
CTG
Gln
>WENV170759063
LUMS01001799
454914
Alphaproteobacteria
TTT
Lys
>WENV170758826
LUMS01000016
112839
Alphaproteobacteria
CAG
Leu
>WENV170759135
LUMS01003625
46034
Alphaproteobacteria
CGA
Ser
>WENV170759177
LUMS01005192
46034
Alphaproteobacteria
CGA
Ser
>WENV170759360
LUMS01015496
180543
Alphaproteobacteria
CAA
Leu
>WENV170759000
LUMS01000925
654103
Alphaproteobacteria
GAA
Phe
>WENV170758832
LUMS01000022
780039
Alphaproteobacteria
GCA
Cys
>WENV170759225
LUMS01006714
304024
Alphaproteobacteria
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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