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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170760515
LUMT01021195
273805
Alphaproteobacteria
ACG
Arg
>WENV170759586
LUMT01000020
455173
Alphaproteobacteria
GAA
Phe
>WENV170759515
LUMT01000002
180542
Alphaproteobacteria
TAG
Leu
>WENV170759561
LUMT01000007
30553
Alphaproteobacteria
GGA
Ser
>WENV170759580
LUMT01000016
780260
Alphaproteobacteria
GCA
Cys
>WENV170760419
LUMT01014877
218220
Alphaproteobacteria
>WENV170759504
LUMT01000002
655301
Alphaproteobacteria
GGT
Thr
>WENV170759521
LUMT01000002
45981
Alphaproteobacteria
TGA
Ser
>WENV170759537
LUMT01000003
277664
Alphaproteobacteria
GTC
Asp
>WENV170759547
LUMT01000006
274224
Alphaproteobacteria
CAT
Met
>WENV170759622
LUMT01000042
655363
Alphaproteobacteria
GGT
Thr
>WENV170759502
LUMT01000002
459032
Alphaproteobacteria
CCA
Trp
>WENV170759512
LUMT01000002
780299
Alphaproteobacteria
TCC
Gly
>WENV170759503
LUMT01000002
274039
Alphaproteobacteria
CAT
Met
>WENV170759529
LUMT01000003
455172
Alphaproteobacteria
GGC
Ala
>WENV170759508
LUMT01000002
455172
Alphaproteobacteria
GGC
Ala
>WENV170759526
LUMT01000002
655300
Alphaproteobacteria
GTT
Asn
>WENV170759569
LUMT01000013
454512
Alphaproteobacteria
CCA
Trp
>WENV170760112
LUMT01003673
273803
Alphaproteobacteria
CCT
Arg
>WENV170759544
LUMT01000006
455360
Alphaproteobacteria
CGC
Ala
>WENV170760462
LUMT01017636
270796
Alphaproteobacteria
GTC
Asp
>WENV170759571
LUMT01000013
655361
Alphaproteobacteria
GCC
Gly
>WENV170760454
LUMT01017404
655271
Alphaproteobacteria
GGT
Thr
>WENV170759539
LUMT01000003
454504
Alphaproteobacteria
CAT
Met
>WENV170759973
LUMT01001558
656140
Alphaproteobacteria
GAC
Val
>WENV170759527
LUMT01000002
455171
Alphaproteobacteria
CGT
Thr
>WENV170759505
LUMT01000002
273907
Alphaproteobacteria
ACG
Arg
>WENV170760361
LUMT01011487
780582
Alphaproteobacteria
TCC
Gly
>WENV170759530
LUMT01000003
281027
Alphaproteobacteria
CCT
Arg
>WENV170759685
LUMT01000165
780298
Alphaproteobacteria
CTG
Gln
>WENV170759506
LUMT01000002
180543
Alphaproteobacteria
CAA
Leu
>WENV170759616
LUMT01000035
780039
Alphaproteobacteria
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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