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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170761527
LUMV01000956
455289
Alphaproteobacteria
TTT
Lys
>WENV170761401
LUMV01000206
655225
Alphaproteobacteria
TTG
Gln
>WENV170761578
LUMV01001733
180542
Alphaproteobacteria
TAG
Leu
>WENV170761493
LUMV01000623
30553
Alphaproteobacteria
GGA
Ser
>WENV170761524
LUMV01000908
780331
Alphaproteobacteria
TCC
Gly
>WENV170761406
LUMV01000228
780260
Alphaproteobacteria
GCA
Cys
>WENV170761411
LUMV01000272
454510
Alphaproteobacteria
CGT
Thr
>WENV170761392
LUMV01000185
655301
Alphaproteobacteria
GGT
Thr
>WENV170761395
LUMV01000189
45981
Alphaproteobacteria
TGA
Ser
>WENV170761489
LUMV01000592
277664
Alphaproteobacteria
GTC
Asp
>WENV170761497
LUMV01000635
274224
Alphaproteobacteria
CAT
Met
>WENV170761455
LUMV01000449
19999
Alphaproteobacteria
GCT
Ser
>WENV170761450
LUMV01000421
655363
Alphaproteobacteria
GGT
Thr
>WENV170761409
LUMV01000270
655363
Alphaproteobacteria
GGT
Thr
>WENV170761466
LUMV01000477
274144
Alphaproteobacteria
GTG
His
>WENV170761436
LUMV01000369
459032
Alphaproteobacteria
CCA
Trp
>WENV170761399
LUMV01000202
780299
Alphaproteobacteria
TCC
Gly
>WENV170761394
LUMV01000187
274039
Alphaproteobacteria
CAT
Met
>WENV170761427
LUMV01000319
455172
Alphaproteobacteria
GGC
Ala
>WENV170761371
LUMV01000089
455172
Alphaproteobacteria
GGC
Ala
>WENV170761656
LUMV01006057
455172
Alphaproteobacteria
GGC
Ala
>WENV170761472
LUMV01000511
276089
Alphaproteobacteria
CCG
Arg
>WENV170761517
LUMV01000830
273450
Alphaproteobacteria
TCT
Arg
>WENV170761562
LUMV01001558
274142
Alphaproteobacteria
GAT
Ile
>WENV170761540
LUMV01001170
274138
Alphaproteobacteria
CAT
Met
>WENV170761365
LUMV01000060
655300
Alphaproteobacteria
GTT
Asn
>WENV170761519
LUMV01000859
454512
Alphaproteobacteria
CCA
Trp
>WENV170761587
LUMV01001968
455360
Alphaproteobacteria
CGC
Ala
>WENV170761500
LUMV01000641
655361
Alphaproteobacteria
GCC
Gly
>WENV170761549
LUMV01001294
655361
Alphaproteobacteria
GCC
Gly
>WENV170761413
LUMV01000278
274141
Alphaproteobacteria
CCT
Arg
>WENV170761433
LUMV01000353
454504
Alphaproteobacteria
CAT
Met
>WENV170761421
LUMV01000304
273907
Alphaproteobacteria
ACG
Arg
>WENV170761523
LUMV01000887
281027
Alphaproteobacteria
CCT
Arg
>WENV170761475
LUMV01000539
780298
Alphaproteobacteria
CTG
Gln
>WENV170761473
LUMV01000518
112839
Alphaproteobacteria
CAG
Leu
>WENV170761432
LUMV01000348
180543
Alphaproteobacteria
CAA
Leu
>WENV170761403
LUMV01000215
780039
Alphaproteobacteria
GCA
Cys
>WENV170761410
LUMV01000272
780039
Alphaproteobacteria
GCA
Cys
>WENV170761480
LUMV01000553
180561
Alphaproteobacteria
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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