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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170767523
LXNH01002376
275828
Alphaproteobacteria
GTC
Asp
>WENV170767524
LXNH01002376
275828
Alphaproteobacteria
GTC
Asp
>WENV170769813
LXNH01071513
655167
Alphaproteobacteria
TTC
Glu
>WENV170768094
LXNH01011830
45799
Alphaproteobacteria
GCT
Ser
>WENV170770582
LXNH01113355
452895
Alphaproteobacteria
TGC
Ala
>WENV170767419
LXNH01001412
653532
Alphaproteobacteria
GTT
Asn
>WENV170770277
LXNH01096069
653532
Alphaproteobacteria
GTT
Asn
>WENV170770631
LXNH01115875
653532
Alphaproteobacteria
GTT
Asn
>WENV170768347
LXNH01017435
653813
Alphaproteobacteria
GAC
Val
>WENV170767522
LXNH01002376
270796
Alphaproteobacteria
GTC
Asp
>WENV170768244
LXNH01014915
273603
Alphaproteobacteria
TGG
Pro
>WENV170769470
LXNH01055685
273603
Alphaproteobacteria
TGG
Pro
>WENV170769486
LXNH01056170
273603
Alphaproteobacteria
TGG
Pro
>WENV170768450
LXNH01019942
656140
Alphaproteobacteria
GAC
Val
>WENV170767289
LXNH01000370
112802
Alphaproteobacteria
GAG
Leu
>WENV170767790
LXNH01005934
658005
Alphaproteobacteria
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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