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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170768431
LXNH01019505
271464
Gammaproteobacteria
TGG
Pro
>WENV170770536
LXNH01110285
271464
Gammaproteobacteria
TGG
Pro
>WENV170767530
LXNH01002487
274150
Gammaproteobacteria
CAT
Met
>WENV170769078
LXNH01041510
274150
Gammaproteobacteria
CAT
Met
>WENV170769230
LXNH01046910
274150
Gammaproteobacteria
CAT
Met
>WENV170770566
LXNH01112103
274150
Gammaproteobacteria
CAT
Met
>WENV170769802
LXNH01071062
270982
Gammaproteobacteria
GAT
Ile
>WENV170770010
LXNH01081227
270982
Gammaproteobacteria
GAT
Ile
>WENV170770149
LXNH01089057
270982
Gammaproteobacteria
GAT
Ile
>WENV170767424
LXNH01001437
272023
Gammaproteobacteria
GAT
Ile
>WENV170767388
LXNH01001113
467367
Gammaproteobacteria
GGT
Thr
>WENV170767454
LXNH01001735
467367
Gammaproteobacteria
GGT
Thr
>WENV170767490
LXNH01002012
467367
Gammaproteobacteria
GGT
Thr
>WENV170767930
LXNH01008170
467367
Gammaproteobacteria
GGT
Thr
>WENV170768944
LXNH01035952
271388
Gammaproteobacteria
ACG
Arg
>WENV170770625
LXNH01115434
271388
Gammaproteobacteria
ACG
Arg
>WENV170768994
LXNH01038073
456247
Gammaproteobacteria
CCA
Trp
>WENV170768801
LXNH01030746
456510
Gammaproteobacteria
GGC
Ala
>WENV170769941
LXNH01077570
456510
Gammaproteobacteria
GGC
Ala
>WENV170769020
LXNH01039189
275549
Gammaproteobacteria
CAT
Met
>WENV170769986
LXNH01079869
275549
Gammaproteobacteria
CAT
Met
>WENV170770442
LXNH01104558
275549
Gammaproteobacteria
CAT
Met
>WENV170770585
LXNH01113597
275658
Gammaproteobacteria
TGG
Pro
>WENV170770517
LXNH01109416
459731
Gammaproteobacteria
GGT
Thr
>WENV170768306
LXNH01016106
459731
Gammaproteobacteria
GGT
Thr
>WENV170769760
LXNH01068854
296667
Gammaproteobacteria
GAT
Ile
>WENV170769761
LXNH01068854
452602
Gammaproteobacteria
TGC
Ala
>WENV170770158
LXNH01089598
452602
Gammaproteobacteria
TGC
Ala
>WENV170767519
LXNH01002357
452908
Gammaproteobacteria
TTT
Lys
>WENV170770178
LXNH01090439
452908
Gammaproteobacteria
TTT
Lys
>WENV170767938
LXNH01008360
453897
Gammaproteobacteria
TAC
Val
>WENV170769298
LXNH01049286
453897
Gammaproteobacteria
TAC
Val
>WENV170770157
LXNH01089598
291681
Gammaproteobacteria
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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