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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
57 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170779769
LZQR01000401
793351
Gammaproteobacteria
GCA
Cys
>WENV170779808
LZQR01000986
451622
Gammaproteobacteria
GGT
Thr
>WENV170779852
LZQR01002520
179970
Gammaproteobacteria
CAA
Leu
>WENV170779802
LZQR01000972
270816
Gammaproteobacteria
CAT
Met
>WENV170779687
LZQR01000002
270982
Gammaproteobacteria
GAT
Ile
>WENV170779749
LZQR01000206
218020
Gammaproteobacteria
GAG
Leu
>WENV170779825
LZQR01001350
218020
Gammaproteobacteria
GAG
Leu
>WENV170779712
LZQR01000038
319301
Gammaproteobacteria
ACG
Arg
>WENV170779801
LZQR01000972
451780
Gammaproteobacteria
GCC
Gly
>WENV170779821
LZQR01001287
451780
Gammaproteobacteria
GCC
Gly
>WENV170779843
LZQR01001863
451780
Gammaproteobacteria
GCC
Gly
>WENV170779848
LZQR01002333
270818
Gammaproteobacteria
CCG
Arg
>WENV170779742
LZQR01000178
491182
Gammaproteobacteria
GTG
His
>WENV170779777
LZQR01000565
451784
Gammaproteobacteria
GAA
Phe
>WENV170779803
LZQR01000986
451784
Gammaproteobacteria
GAA
Phe
>WENV170779855
LZQR01002653
86896
Gammaproteobacteria
GGA
Ser
>WENV170779820
LZQR01001287
112293
Gammaproteobacteria
TAA
Leu
>WENV170779823
LZQR01001287
112293
Gammaproteobacteria
TAA
Leu
>WENV170779842
LZQR01001863
112293
Gammaproteobacteria
TAA
Leu
>WENV170779750
LZQR01000222
319299
Gammaproteobacteria
CCA
Trp
>WENV170779839
LZQR01001647
275791
Gammaproteobacteria
GAT
Ile
>WENV170779728
LZQR01000103
779470
Gammaproteobacteria
GCA
Cys
>WENV170779811
LZQR01001052
779470
Gammaproteobacteria
GCA
Cys
>WENV170779714
LZQR01000041
30308
Gammaproteobacteria
TGA
Ser
>WENV170779787
LZQR01000691
30308
Gammaproteobacteria
TGA
Ser
>WENV170779789
LZQR01000799
30308
Gammaproteobacteria
TGA
Ser
>WENV170779834
LZQR01001431
30308
Gammaproteobacteria
TGA
Ser
>WENV170779775
LZQR01000550
270824
Gammaproteobacteria
CCT
Arg
>WENV170779813
LZQR01001077
270815
Gammaproteobacteria
TCT
Arg
>WENV170779835
LZQR01001470
490063
Gammaproteobacteria
TAC
Val
>WENV170779744
LZQR01000179
490063
Gammaproteobacteria
TAC
Val
>WENV170779832
LZQR01001419
452899
Gammaproteobacteria
TAC
Val
>WENV170779818
LZQR01001270
525895
Gammaproteobacteria
GTC
Asp
>WENV170779805
LZQR01000986
451786
Gammaproteobacteria
GTT
Asn
>WENV170779807
LZQR01000986
451786
Gammaproteobacteria
GTT
Asn
>WENV170779746
LZQR01000183
270817
Gammaproteobacteria
GAC
Val
>WENV170779767
LZQR01000367
306408
Gammaproteobacteria
CAT
Met
>WENV170779849
LZQR01002333
451782
Gammaproteobacteria
GTG
His
>WENV170779774
LZQR01000451
270822
Gammaproteobacteria
CCA
Trp
>WENV170779778
LZQR01000567
157123
Gammaproteobacteria
GTA
Tyr
>WENV170779779
LZQR01000567
157123
Gammaproteobacteria
GTA
Tyr
>WENV170779729
LZQR01000107
452908
Gammaproteobacteria
TTT
Lys
>WENV170779722
LZQR01000090
457459
Gammaproteobacteria
GGC
Ala
>WENV170779830
LZQR01001419
451837
Gammaproteobacteria
TTC
Glu
>WENV170779724
LZQR01000090
491021
Gammaproteobacteria
TTC
Glu
>WENV170779863
LZQR01004059
180152
Gammaproteobacteria
TAG
Leu
>WENV170779865
LZQR01004059
180152
Gammaproteobacteria
TAG
Leu
>WENV170779867
LZQR01004059
180152
Gammaproteobacteria
TAG
Leu
>WENV170779869
LZQR01004059
180152
Gammaproteobacteria
TAG
Leu
>WENV170779827
LZQR01001402
270819
Gammaproteobacteria
ACG
Arg
>WENV170779829
LZQR01001402
270819
Gammaproteobacteria
ACG
Arg
>WENV170779844
LZQR01002035
270823
Gammaproteobacteria
TGG
Pro
>WENV170779850
LZQR01002333
270823
Gammaproteobacteria
TGG
Pro
>WENV170779828
LZQR01001402
19867
Gammaproteobacteria
GCT
Ser
>WENV170779864
LZQR01004059
653554
Gammaproteobacteria
TTG
Gln
>WENV170779868
LZQR01004059
653554
Gammaproteobacteria
TTG
Gln
>WENV170779770
LZQR01000401
122618
Gammaproteobacteria
TAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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