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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170780336
MAAA01029006
273090
Gammaproteobacteria
CCA
Trp
>WENV170780338
MAAA01029100
277478
Gammaproteobacteria
CCA
Trp
>WENV170779888
MAAA01000714
270982
Gammaproteobacteria
GAT
Ile
>WENV170779978
MAAA01005172
270982
Gammaproteobacteria
GAT
Ile
>WENV170779991
MAAA01007120
270982
Gammaproteobacteria
GAT
Ile
>WENV170779971
MAAA01004884
273099
Gammaproteobacteria
GAT
Ile
>WENV170780331
MAAA01028787
454096
Gammaproteobacteria
GCC
Gly
>WENV170779874
MAAA01000154
456510
Gammaproteobacteria
GGC
Ala
>WENV170780329
MAAA01028700
454091
Gammaproteobacteria
GGC
Ala
>WENV170780325
MAAA01028477
180300
Gammaproteobacteria
GTA
Tyr
>WENV170780346
MAAA01029571
180300
Gammaproteobacteria
GTA
Tyr
>WENV170780333
MAAA01028787
180304
Gammaproteobacteria
TAA
Leu
>WENV170779992
MAAA01007120
452579
Gammaproteobacteria
TGC
Ala
>WENV170779979
MAAA01005172
452579
Gammaproteobacteria
TGC
Ala
>WENV170780340
MAAA01029165
273095
Gammaproteobacteria
TGG
Pro
>WENV170780345
MAAA01029571
458425
Gammaproteobacteria
TGT
Thr
>WENV170780330
MAAA01028700
458426
Gammaproteobacteria
TTC
Glu
>WENV170779877
MAAA01000386
451837
Gammaproteobacteria
TTC
Glu
>WENV170779883
MAAA01000627
451837
Gammaproteobacteria
TTC
Glu
>WENV170780094
MAAA01014208
451837
Gammaproteobacteria
TTC
Glu
>WENV170780097
MAAA01014269
451837
Gammaproteobacteria
TTC
Glu
>WENV170780137
MAAA01016333
451837
Gammaproteobacteria
TTC
Glu
>WENV170780252
MAAA01024563
451837
Gammaproteobacteria
TTC
Glu
>WENV170780274
MAAA01026158
451837
Gammaproteobacteria
TTC
Glu
>WENV170780276
MAAA01026158
451837
Gammaproteobacteria
TTC
Glu
>WENV170780282
MAAA01026660
451837
Gammaproteobacteria
TTC
Glu
>WENV170780337
MAAA01029067
482757
Gammaproteobacteria
TTT
Lys
>WENV170780023
MAAA01009312
511114
Gammaproteobacteria
TTT
Lys
>WENV170780218
MAAA01021721
511114
Gammaproteobacteria
TTT
Lys
>WENV170780219
MAAA01021722
511114
Gammaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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