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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
86 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170783717
MAAC01018413
241030
Alphaproteobacteria
TCT
Arg
>WENV170782390
MAAC01009744
653537
Alphaproteobacteria
GGT
Thr
>WENV170782356
MAAC01009716
454566
Alphaproteobacteria
GAA
Phe
>WENV170782399
MAAC01009746
273797
Alphaproteobacteria
GGG
Pro
>WENV170783008
MAAC01012791
273797
Alphaproteobacteria
GGG
Pro
>WENV170782629
MAAC01010875
452917
Alphaproteobacteria
TAC
Val
>WENV170782998
MAAC01012678
452917
Alphaproteobacteria
TAC
Val
>WENV170783745
MAAC01018493
452917
Alphaproteobacteria
TAC
Val
>WENV170783883
MAAC01019361
452917
Alphaproteobacteria
TAC
Val
>WENV170783019
MAAC01012938
655167
Alphaproteobacteria
TTC
Glu
>WENV170783020
MAAC01012938
655167
Alphaproteobacteria
TTC
Glu
>WENV170782994
MAAC01012641
780326
Alphaproteobacteria
CCC
Gly
>WENV170782990
MAAC01012597
780326
Alphaproteobacteria
CCC
Gly
>WENV170782127
MAAC01009379
780326
Alphaproteobacteria
CCC
Gly
>WENV170783004
MAAC01012746
452884
Alphaproteobacteria
CCA
Trp
>WENV170783898
MAAC01019428
452884
Alphaproteobacteria
CCA
Trp
>WENV170782986
MAAC01012569
46070
Alphaproteobacteria
CGA
Ser
>WENV170783744
MAAC01018491
46070
Alphaproteobacteria
CGA
Ser
>WENV170782400
MAAC01009746
653534
Alphaproteobacteria
GCC
Gly
>WENV170782997
MAAC01012676
653534
Alphaproteobacteria
GCC
Gly
>WENV170783005
MAAC01012751
291540
Alphaproteobacteria
TGG
Pro
>WENV170783738
MAAC01018473
656001
Alphaproteobacteria
GCC
Gly
>WENV170783737
MAAC01018473
656001
Alphaproteobacteria
GCC
Gly
>WENV170783736
MAAC01018473
656001
Alphaproteobacteria
GCC
Gly
>WENV170782401
MAAC01009746
218119
Alphaproteobacteria
>WENV170783000
MAAC01012706
218119
Alphaproteobacteria
>WENV170783739
MAAC01018473
218119
Alphaproteobacteria
>WENV170783884
MAAC01019361
218119
Alphaproteobacteria
>WENV170782402
MAAC01009746
653538
Alphaproteobacteria
TTC
Glu
>WENV170782991
MAAC01012619
653538
Alphaproteobacteria
TTC
Glu
>WENV170782992
MAAC01012627
653538
Alphaproteobacteria
TTC
Glu
>WENV170782418
MAAC01009759
456410
Alphaproteobacteria
CGT
Thr
>WENV170783735
MAAC01018449
661003
Alphaproteobacteria
GAA
Phe
>WENV170783044
MAAC01013308
661003
Alphaproteobacteria
GAA
Phe
>WENV170782987
MAAC01012573
661003
Alphaproteobacteria
GAA
Phe
>WENV170782380
MAAC01009744
661003
Alphaproteobacteria
GAA
Phe
>WENV170782028
MAAC01006608
661003
Alphaproteobacteria
GAA
Phe
>WENV170781810
MAAC01000755
661003
Alphaproteobacteria
GAA
Phe
>WENV170782021
MAAC01006462
780661
Alphaproteobacteria
GCA
Cys
>WENV170783033
MAAC01013213
780661
Alphaproteobacteria
GCA
Cys
>WENV170783013
MAAC01012851
655359
Alphaproteobacteria
GAC
Val
>WENV170782414
MAAC01009748
655359
Alphaproteobacteria
GAC
Val
>WENV170782996
MAAC01012676
154065
Alphaproteobacteria
GAG
Leu
>WENV170782007
MAAC01006070
47685
Alphaproteobacteria
CGA
Ser
>WENV170783001
MAAC01012707
451742
Alphaproteobacteria
GGC
Ala
>WENV170782412
MAAC01009746
653532
Alphaproteobacteria
GTT
Asn
>WENV170783726
MAAC01018433
653532
Alphaproteobacteria
GTT
Asn
>WENV170783864
MAAC01019248
653532
Alphaproteobacteria
GTT
Asn
>WENV170782290
MAAC01009671
275869
Alphaproteobacteria
CAT
Met
>WENV170781838
MAAC01001850
655394
Alphaproteobacteria
GTT
Asn
>WENV170781902
MAAC01004048
655394
Alphaproteobacteria
GTT
Asn
>WENV170782081
MAAC01008084
655394
Alphaproteobacteria
GTT
Asn
>WENV170781909
MAAC01004227
274131
Alphaproteobacteria
CAT
Met
>WENV170782411
MAAC01009746
274131
Alphaproteobacteria
CAT
Met
>WENV170783027
MAAC01013091
274131
Alphaproteobacteria
CAT
Met
>WENV170782395
MAAC01009745
455362
Alphaproteobacteria
TTT
Lys
>WENV170783740
MAAC01018483
180749
Alphaproteobacteria
TAG
Leu
>WENV170782415
MAAC01009752
655358
Alphaproteobacteria
TTG
Gln
>WENV170783006
MAAC01012762
655358
Alphaproteobacteria
TTG
Gln
>WENV170782097
MAAC01008296
46072
Alphaproteobacteria
GCT
Ser
>WENV170782391
MAAC01009744
46072
Alphaproteobacteria
GCT
Ser
>WENV170783894
MAAC01019413
278722
Alphaproteobacteria
ACG
Arg
>WENV170782404
MAAC01009746
780327
Alphaproteobacteria
GCA
Cys
>WENV170782386
MAAC01009744
655166
Alphaproteobacteria
CAC
Val
>WENV170782084
MAAC01008156
273803
Alphaproteobacteria
CCT
Arg
>WENV170783719
MAAC01018415
275157
Alphaproteobacteria
TGG
Pro
>WENV170782037
MAAC01006664
46222
Alphaproteobacteria
GGA
Ser
>WENV170783729
MAAC01018442
46222
Alphaproteobacteria
GGA
Ser
>WENV170782995
MAAC01012649
270796
Alphaproteobacteria
GTC
Asp
>WENV170782328
MAAC01009695
154064
Alphaproteobacteria
CAG
Leu
>WENV170783012
MAAC01012848
274133
Alphaproteobacteria
ACG
Arg
>WENV170783893
MAAC01019411
271956
Alphaproteobacteria
CAT
Met
>WENV170781839
MAAC01001860
270897
Alphaproteobacteria
CCT
Arg
>WENV170781910
MAAC01004239
270897
Alphaproteobacteria
CCT
Arg
>WENV170781936
MAAC01004759
270897
Alphaproteobacteria
CCT
Arg
>WENV170783879
MAAC01019349
218137
Alphaproteobacteria
TAG
Leu
>WENV170782988
MAAC01012579
218137
Alphaproteobacteria
TAG
Leu
>WENV170782294
MAAC01009671
112802
Alphaproteobacteria
GAG
Leu
>WENV170782371
MAAC01009734
112802
Alphaproteobacteria
GAG
Leu
>WENV170782382
MAAC01009744
112802
Alphaproteobacteria
GAG
Leu
>WENV170783034
MAAC01013214
112802
Alphaproteobacteria
GAG
Leu
>WENV170783704
MAAC01018396
275989
Alphaproteobacteria
CAT
Met
>WENV170782396
MAAC01009746
46069
Alphaproteobacteria
GGA
Ser
>WENV170782393
MAAC01009745
274130
Alphaproteobacteria
CGG
Pro
>WENV170783870
MAAC01019314
658005
Alphaproteobacteria
GCC
Gly
>WENV170783869
MAAC01019314
658005
Alphaproteobacteria
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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