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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170784454
MCND01000124
271411
Gammaproteobacteria
GGG
Pro
>WENV170784449
MCND01000092
112358
Gammaproteobacteria
TAA
Leu
>WENV170784438
MCND01000020
45746
Gammaproteobacteria
CGA
Ser
>WENV170784439
MCND01000025
455431
Gammaproteobacteria
TAC
Val
>WENV170784464
MCND01000227
87261
Gammaproteobacteria
TGA
Ser
>WENV170784441
MCND01000025
455188
Gammaproteobacteria
TAC
Val
>WENV170784451
MCND01000107
452337
Gammaproteobacteria
GTT
Asn
>WENV170784457
MCND01000143
180068
Gammaproteobacteria
TAG
Leu
>WENV170784505
MCND01002552
458856
Gammaproteobacteria
GAA
Phe
>WENV170784437
MCND01000020
779594
Gammaproteobacteria
CCC
Gly
>WENV170784456
MCND01000143
452332
Gammaproteobacteria
GTG
His
>WENV170784487
MCND01001078
30385
Gammaproteobacteria
GCT
Ser
>WENV170784443
MCND01000034
274252
Gammaproteobacteria
CAT
Met
>WENV170784467
MCND01000287
271409
Gammaproteobacteria
CCG
Arg
>WENV170784434
MCND01000001
180588
Gammaproteobacteria
CAA
Leu
>WENV170784470
MCND01000307
273025
Gammaproteobacteria
CCT
Arg
>WENV170784448
MCND01000067
112359
Gammaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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