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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170784622
MCNF01000096
271411
Gammaproteobacteria
GGG
Pro
>WENV170784655
MCNF01000632
456952
Gammaproteobacteria
CGC
Ala
>WENV170784614
MCNF01000022
112358
Gammaproteobacteria
TAA
Leu
>WENV170784624
MCNF01000119
45746
Gammaproteobacteria
CGA
Ser
>WENV170784645
MCNF01000355
87261
Gammaproteobacteria
TGA
Ser
>WENV170784643
MCNF01000285
452337
Gammaproteobacteria
GTT
Asn
>WENV170784657
MCNF01000697
47108
Gammaproteobacteria
TGA
Ser
>WENV170784611
MCNF01000013
180068
Gammaproteobacteria
TAG
Leu
>WENV170784617
MCNF01000042
779594
Gammaproteobacteria
CCC
Gly
>WENV170784610
MCNF01000013
452332
Gammaproteobacteria
GTG
His
>WENV170784608
MCNF01000006
30385
Gammaproteobacteria
GCT
Ser
>WENV170784616
MCNF01000035
274252
Gammaproteobacteria
CAT
Met
>WENV170784615
MCNF01000029
180588
Gammaproteobacteria
CAA
Leu
>WENV170784637
MCNF01000208
273025
Gammaproteobacteria
CCT
Arg
>WENV170784649
MCNF01000447
182405
Gammaproteobacteria
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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