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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
70 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170812506
MDSW01184564
457159
Alphaproteobacteria
CGC
Ala
>WENV170803296
MDSW01027831
275843
Alphaproteobacteria
CCT
Arg
>WENV170806552
MDSW01083575
275828
Alphaproteobacteria
GTC
Asp
>WENV170811811
MDSW01173129
273797
Alphaproteobacteria
GGG
Pro
>WENV170810288
MDSW01146358
452917
Alphaproteobacteria
TAC
Val
>WENV170804455
MDSW01047788
457318
Alphaproteobacteria
CGT
Thr
>WENV170803455
MDSW01030124
273805
Alphaproteobacteria
ACG
Arg
>WENV170809754
MDSW01137605
452884
Alphaproteobacteria
CCA
Trp
>WENV170810074
MDSW01142905
270792
Alphaproteobacteria
CAT
Met
>WENV170813386
MDSW01199285
273452
Alphaproteobacteria
CAT
Met
>WENV170804643
MDSW01050979
653534
Alphaproteobacteria
GCC
Gly
>WENV170804644
MDSW01050979
653534
Alphaproteobacteria
GCC
Gly
>WENV170811056
MDSW01159908
452629
Alphaproteobacteria
GAA
Phe
>WENV170811229
MDSW01163047
655623
Alphaproteobacteria
GCC
Gly
>WENV170804431
MDSW01047458
218119
Alphaproteobacteria
>WENV170806133
MDSW01077263
219139
Alphaproteobacteria
TAG
Leu
>WENV170811847
MDSW01173814
277700
Alphaproteobacteria
GTG
His
>WENV170810693
MDSW01153494
277700
Alphaproteobacteria
GTG
His
>WENV170808286
MDSW01112471
277700
Alphaproteobacteria
GTG
His
>WENV170808319
MDSW01112984
274224
Alphaproteobacteria
CAT
Met
>WENV170811848
MDSW01173814
655624
Alphaproteobacteria
TTG
Gln
>WENV170811752
MDSW01172095
451742
Alphaproteobacteria
GGC
Ala
>WENV170802749
MDSW01018924
653532
Alphaproteobacteria
GTT
Asn
>WENV170807333
MDSW01096889
653532
Alphaproteobacteria
GTT
Asn
>WENV170808374
MDSW01114033
653532
Alphaproteobacteria
GTT
Asn
>WENV170808891
MDSW01122733
653532
Alphaproteobacteria
GTT
Asn
>WENV170813640
MDSW01203901
653532
Alphaproteobacteria
GTT
Asn
>WENV170807918
MDSW01106310
780630
Alphaproteobacteria
CCC
Gly
>WENV170814426
MDSW01216862
653813
Alphaproteobacteria
GAC
Val
>WENV170805947
MDSW01073858
655566
Alphaproteobacteria
GAC
Val
>WENV170802841
MDSW01020162
294326
Alphaproteobacteria
CCG
Arg
>WENV170813886
MDSW01207986
454059
Alphaproteobacteria
TTT
Lys
>WENV170812850
MDSW01190244
454059
Alphaproteobacteria
TTT
Lys
>WENV170809627
MDSW01135723
454059
Alphaproteobacteria
TTT
Lys
>WENV170807685
MDSW01102718
454059
Alphaproteobacteria
TTT
Lys
>WENV170802007
MDSW01005978
274223
Alphaproteobacteria
CCG
Arg
>WENV170808669
MDSW01119036
274223
Alphaproteobacteria
CCG
Arg
>WENV170813617
MDSW01203539
274223
Alphaproteobacteria
CCG
Arg
>WENV170806365
MDSW01080769
113188
Alphaproteobacteria
GAG
Leu
>WENV170807741
MDSW01103513
180720
Alphaproteobacteria
TAG
Leu
>WENV170810474
MDSW01149433
180720
Alphaproteobacteria
TAG
Leu
>WENV170811286
MDSW01164016
180720
Alphaproteobacteria
TAG
Leu
>WENV170814317
MDSW01214702
655358
Alphaproteobacteria
TTG
Gln
>WENV170812621
MDSW01186617
180729
Alphaproteobacteria
CAG
Leu
>WENV170811242
MDSW01163287
113418
Alphaproteobacteria
CAG
Leu
>WENV170809517
MDSW01133571
275730
Alphaproteobacteria
TGG
Pro
>WENV170807005
MDSW01091117
113228
Alphaproteobacteria
CAG
Leu
>WENV170803111
MDSW01024839
270796
Alphaproteobacteria
GTC
Asp
>WENV170809564
MDSW01134404
270796
Alphaproteobacteria
GTC
Asp
>WENV170809565
MDSW01134404
270796
Alphaproteobacteria
GTC
Asp
>WENV170814354
MDSW01215275
270796
Alphaproteobacteria
GTC
Asp
>WENV170809265
MDSW01128880
274133
Alphaproteobacteria
ACG
Arg
>WENV170813224
MDSW01196246
455436
Alphaproteobacteria
TTC
Glu
>WENV170806821
MDSW01087763
275560
Alphaproteobacteria
ACG
Arg
>WENV170810527
MDSW01150411
656140
Alphaproteobacteria
GAC
Val
>WENV170807028
MDSW01091527
656140
Alphaproteobacteria
GAC
Val
>WENV170804456
MDSW01047788
270798
Alphaproteobacteria
CGG
Pro
>WENV170803780
MDSW01035568
671670
Alphaproteobacteria
CAC
Val
>WENV170801713
MDSW01000958
454318
Alphaproteobacteria
GGC
Ala
>WENV170802986
MDSW01022925
302244
Alphaproteobacteria
TCT
Arg
>WENV170811228
MDSW01163047
654685
Alphaproteobacteria
GGT
Thr
>WENV170813393
MDSW01199398
780582
Alphaproteobacteria
TCC
Gly
>WENV170812058
MDSW01176858
780582
Alphaproteobacteria
TCC
Gly
>WENV170808751
MDSW01120580
780582
Alphaproteobacteria
TCC
Gly
>WENV170807804
MDSW01104619
454914
Alphaproteobacteria
TTT
Lys
>WENV170813627
MDSW01203690
454914
Alphaproteobacteria
TTT
Lys
>WENV170808202
MDSW01110938
275989
Alphaproteobacteria
CAT
Met
>WENV170812060
MDSW01176942
779596
Alphaproteobacteria
TCC
Gly
>WENV170804230
MDSW01043925
453944
Alphaproteobacteria
TTC
Glu
>WENV170814594
MDSW01219744
653539
Alphaproteobacteria
GAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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