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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
100 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170840973
MDSZ01214193
276122
Alphaproteobacteria
ACG
Arg
>WENV170842754
MDSZ01247051
116949
Alphaproteobacteria
CAG
Leu
>WENV170831989
MDSZ01054055
112839
Alphaproteobacteria
CAG
Leu
>WENV170843896
MDSZ01268554
273452
Alphaproteobacteria
CAT
Met
>WENV170832708
MDSZ01067221
281026
Alphaproteobacteria
CAT
Met
>WENV170842085
MDSZ01233719
274224
Alphaproteobacteria
CAT
Met
>WENV170838301
MDSZ01165573
274224
Alphaproteobacteria
CAT
Met
>WENV170831119
MDSZ01038867
274224
Alphaproteobacteria
CAT
Met
>WENV170837148
MDSZ01144285
274138
Alphaproteobacteria
CAT
Met
>WENV170838232
MDSZ01164225
274138
Alphaproteobacteria
CAT
Met
>WENV170843575
MDSZ01262651
270799
Alphaproteobacteria
CAT
Met
>WENV170831861
MDSZ01051907
270799
Alphaproteobacteria
CAT
Met
>WENV170836400
MDSZ01130902
271956
Alphaproteobacteria
CAT
Met
>WENV170830659
MDSZ01030462
454504
Alphaproteobacteria
CAT
Met
>WENV170840430
MDSZ01204265
452884
Alphaproteobacteria
CCA
Trp
>WENV170839316
MDSZ01183564
452894
Alphaproteobacteria
CCA
Trp
>WENV170833727
MDSZ01084820
454512
Alphaproteobacteria
CCA
Trp
>WENV170838386
MDSZ01166767
477874
Alphaproteobacteria
CCA
Trp
>WENV170842883
MDSZ01249241
661024
Alphaproteobacteria
CCC
Gly
>WENV170838567
MDSZ01170251
275927
Alphaproteobacteria
CCG
Arg
>WENV170838750
MDSZ01173823
301299
Alphaproteobacteria
CCG
Arg
>WENV170836153
MDSZ01126385
46086
Alphaproteobacteria
CGA
Ser
>WENV170838382
MDSZ01166767
48659
Alphaproteobacteria
CGA
Ser
>WENV170841200
MDSZ01217936
454430
Alphaproteobacteria
CGC
Ala
>WENV170837063
MDSZ01142606
456892
Alphaproteobacteria
CGC
Ala
>WENV170832982
MDSZ01071835
455360
Alphaproteobacteria
CGC
Ala
>WENV170840067
MDSZ01197526
455360
Alphaproteobacteria
CGC
Ala
>WENV170840800
MDSZ01211494
273448
Alphaproteobacteria
CGG
Pro
>WENV170829122
MDSZ01003262
294369
Alphaproteobacteria
CGG
Pro
>WENV170834215
MDSZ01093840
454510
Alphaproteobacteria
CGT
Thr
>WENV170839363
MDSZ01184390
654960
Alphaproteobacteria
CTC
Glu
>WENV170839331
MDSZ01183736
779636
Alphaproteobacteria
CTG
Gln
>WENV170835144
MDSZ01108553
780346
Alphaproteobacteria
CTG
Gln
>WENV170836138
MDSZ01125952
780346
Alphaproteobacteria
CTG
Gln
>WENV170838384
MDSZ01166767
454432
Alphaproteobacteria
GAA
Phe
>WENV170841059
MDSZ01215513
655566
Alphaproteobacteria
GAC
Val
>WENV170836036
MDSZ01123900
112429
Alphaproteobacteria
GAG
Leu
>WENV170830461
MDSZ01027348
780039
Alphaproteobacteria
GCA
Cys
>WENV170833780
MDSZ01085840
780039
Alphaproteobacteria
GCA
Cys
>WENV170834214
MDSZ01093840
780039
Alphaproteobacteria
GCA
Cys
>WENV170840797
MDSZ01211488
655361
Alphaproteobacteria
GCC
Gly
>WENV170835880
MDSZ01121425
655361
Alphaproteobacteria
GCC
Gly
>WENV170842923
MDSZ01249968
654681
Alphaproteobacteria
GCC
Gly
>WENV170840514
MDSZ01206053
654915
Alphaproteobacteria
GCC
Gly
>WENV170841932
MDSZ01230830
30705
Alphaproteobacteria
GCT
Ser
>WENV170842829
MDSZ01248122
20317
Alphaproteobacteria
GCT
Ser
>WENV170835614
MDSZ01117410
20317
Alphaproteobacteria
GCT
Ser
>WENV170837704
MDSZ01154080
30553
Alphaproteobacteria
GGA
Ser
>WENV170834953
MDSZ01105668
31090
Alphaproteobacteria
GGA
Ser
>WENV170832457
MDSZ01062879
48680
Alphaproteobacteria
GGA
Ser
>WENV170831550
MDSZ01046169
454434
Alphaproteobacteria
GGC
Ala
>WENV170843562
MDSZ01262566
451742
Alphaproteobacteria
GGC
Ala
>WENV170840044
MDSZ01197196
455172
Alphaproteobacteria
GGC
Ala
>WENV170835994
MDSZ01123235
270880
Alphaproteobacteria
GGG
Pro
>WENV170836357
MDSZ01129964
655363
Alphaproteobacteria
GGT
Thr
>WENV170835930
MDSZ01122045
655363
Alphaproteobacteria
GGT
Thr
>WENV170830148
MDSZ01021960
655363
Alphaproteobacteria
GGT
Thr
>WENV170838380
MDSZ01166767
671377
Alphaproteobacteria
GGT
Thr
>WENV170835114
MDSZ01107960
655271
Alphaproteobacteria
GGT
Thr
>WENV170832307
MDSZ01059431
270796
Alphaproteobacteria
GTC
Asp
>WENV170838385
MDSZ01166767
282974
Alphaproteobacteria
GTG
His
>WENV170837843
MDSZ01156467
273155
Alphaproteobacteria
GTG
His
>WENV170832554
MDSZ01064604
274144
Alphaproteobacteria
GTG
His
>WENV170833374
MDSZ01078856
273451
Alphaproteobacteria
GTG
His
>WENV170840802
MDSZ01211526
301178
Alphaproteobacteria
GTG
His
>WENV170842794
MDSZ01247729
654913
Alphaproteobacteria
GTT
Asn
>WENV170829468
MDSZ01009404
653532
Alphaproteobacteria
GTT
Asn
>WENV170831302
MDSZ01041769
653532
Alphaproteobacteria
GTT
Asn
>WENV170837555
MDSZ01151127
653532
Alphaproteobacteria
GTT
Asn
>WENV170842317
MDSZ01238156
653532
Alphaproteobacteria
GTT
Asn
>WENV170842844
MDSZ01248399
653532
Alphaproteobacteria
GTT
Asn
>WENV170842628
MDSZ01244386
653931
Alphaproteobacteria
GTT
Asn
>WENV170842629
MDSZ01244386
653931
Alphaproteobacteria
GTT
Asn
>WENV170839770
MDSZ01192158
153953
Alphaproteobacteria
TAA
Leu
>WENV170834442
MDSZ01097175
452755
Alphaproteobacteria
TAC
Val
>WENV170843219
MDSZ01256217
180320
Alphaproteobacteria
TAG
Leu
>WENV170834555
MDSZ01099073
180561
Alphaproteobacteria
TAG
Leu
>WENV170836711
MDSZ01136082
780331
Alphaproteobacteria
TCC
Gly
>WENV170830529
MDSZ01028569
780331
Alphaproteobacteria
TCC
Gly
>WENV170834492
MDSZ01097914
784639
Alphaproteobacteria
TCC
Gly
>WENV170830723
MDSZ01031711
282775
Alphaproteobacteria
TCT
Arg
>WENV170838981
MDSZ01177615
273450
Alphaproteobacteria
TCT
Arg
>WENV170842016
MDSZ01232338
46044
Alphaproteobacteria
TGA
Ser
>WENV170838218
MDSZ01163845
452895
Alphaproteobacteria
TGC
Ala
>WENV170830264
MDSZ01023895
288840
Alphaproteobacteria
TGG
Pro
>WENV170841523
MDSZ01223893
270887
Alphaproteobacteria
TGG
Pro
>WENV170834569
MDSZ01099459
273603
Alphaproteobacteria
TGG
Pro
>WENV170836564
MDSZ01133814
454433
Alphaproteobacteria
TGT
Thr
>WENV170838090
MDSZ01161403
454433
Alphaproteobacteria
TGT
Thr
>WENV170841794
MDSZ01228939
655365
Alphaproteobacteria
TTC
Glu
>WENV170836813
MDSZ01137935
455436
Alphaproteobacteria
TTC
Glu
>WENV170843399
MDSZ01259470
455436
Alphaproteobacteria
TTC
Glu
>WENV170840127
MDSZ01198619
453944
Alphaproteobacteria
TTC
Glu
>WENV170829123
MDSZ01003262
782892
Alphaproteobacteria
TTG
Gln
>WENV170832826
MDSZ01069239
654995
Alphaproteobacteria
TTG
Gln
>WENV170842337
MDSZ01238583
479047
Alphaproteobacteria
TTT
Lys
>WENV170842336
MDSZ01238583
479047
Alphaproteobacteria
TTT
Lys
>WENV170831399
MDSZ01043557
457162
Alphaproteobacteria
TTT
Lys
>WENV170836664
MDSZ01135306
454059
Alphaproteobacteria
TTT
Lys
>WENV170842007
MDSZ01232121
288848
Alphaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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